Literature DB >> 10605087

Sign determination of dipolar couplings in field-oriented bicelles by variable angle sample spinning (VASS).

F Tian1, J A Losonczi, M W Fischer, J H Prestegard.   

Abstract

Residual dipolar couplings are being increasingly used as structural constraints for NMR studies of biomolecules. A problem arises when dipolar coupling contributions are larger than scalar contributions for a given spin pair, as is commonly observed in solid state NMR studies, in that signs of dipolar couplings cannot easily be determined. Here the sign ambiguities of dipolar couplings in field-oriented bicelles are resolved by variable angle sample spinning (VASS) techniques. The director behavior of field-oriented bicelles (DMPC/DHPC, DMPC/CHAPSO) in VASS is studied by 31P NMR. A stable configuration occurs when the spinning angle is smaller than the magic angle, 54.7 degrees, and the director (or bicelle normal) of the disks is mainly distributed in a plane perpendicular to the rotation axis. Since the dipolar couplings depend on how the bicelles are oriented with respect to the magnetic field, it is shown that the dipolar interaction can be scaled to the same order as the J-coupling by moving the spinning axis from 0 degree toward 54.7 degrees. Thus the relative sign of dipolar and scalar couplings can be determined.

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Year:  1999        PMID: 10605087     DOI: 10.1023/a:1008356210291

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  8 in total

1.  Residual dipolar couplings as new conformational restraints in isotropically 13C-enriched oligosaccharides.

Authors:  G R Kiddle; S W Homans
Journal:  FEBS Lett       Date:  1998-09-25       Impact factor: 4.124

Review 2.  New techniques in structural NMR--anisotropic interactions.

Authors:  J H Prestegard
Journal:  Nat Struct Biol       Date:  1998-07

3.  New methods of structure refinement for macromolecular structure determination by NMR.

Authors:  G M Clore; A M Gronenborn
Journal:  Proc Natl Acad Sci U S A       Date:  1998-05-26       Impact factor: 11.205

4.  Direct measurement of distances and angles in biomolecules by NMR in a dilute liquid crystalline medium.

Authors:  N Tjandra; A Bax
Journal:  Science       Date:  1997-11-07       Impact factor: 47.728

5.  Nuclear magnetic resonance characterization of the myristoylated, N-terminal fragment of ADP-ribosylation factor 1 in a magnetically oriented membrane array.

Authors:  J A Losonczi; J H Prestegard
Journal:  Biochemistry       Date:  1998-01-13       Impact factor: 3.162

6.  Characterization of magnetically orientable bilayers in mixtures of dihexanoylphosphatidylcholine and dimyristoylphosphatidylcholine by solid-state NMR.

Authors:  C R Sanders; J P Schwonek
Journal:  Biochemistry       Date:  1992-09-22       Impact factor: 3.162

7.  Understanding covalent modifications of proteins by lipids: where cell biology and biophysics mingle.

Authors:  R S Bhatnagar; J I Gordon
Journal:  Trends Cell Biol       Date:  1997-01       Impact factor: 20.808

8.  Nuclear magnetic dipole interactions in field-oriented proteins: information for structure determination in solution.

Authors:  J R Tolman; J M Flanagan; M A Kennedy; J H Prestegard
Journal:  Proc Natl Acad Sci U S A       Date:  1995-09-26       Impact factor: 11.205

  8 in total
  14 in total

1.  Switched-angle spinning applied to bicelles containing phospholipid-associated peptides.

Authors:  Giorgia Zandomeneghi; Philip T F Williamson; Andreas Hunkeler; Beat H Meier
Journal:  J Biomol NMR       Date:  2003-02       Impact factor: 2.835

2.  Measurement of scaled residual dipolar couplings in proteins using variable-angle sample spinning.

Authors:  Nathalie Lancelot; Karim Elbayed; Alberto Bianco; Martial Piotto
Journal:  J Biomol NMR       Date:  2004-07       Impact factor: 2.835

3.  Measurements of residual dipolar couplings in peptide inhibitors weakly aligned by transient binding to peptide amyloid fibrils.

Authors:  Zhongjing Chen; Bernd Reif
Journal:  J Biomol NMR       Date:  2004-08       Impact factor: 2.835

4.  Adiabatic-passage cross polarization in N-15 NMR spectroscopy of peptides weakly associated to phospholipids: determination of large RDC.

Authors:  Giorgia Zandomeneghi; Beat H Meier
Journal:  J Biomol NMR       Date:  2004-11       Impact factor: 2.835

5.  Bicelle-enabled structural studies on a membrane-associated cytochrome B5 by solid-state MAS NMR spectroscopy.

Authors:  Jiadi Xu; Ulrich H N Dürr; Sang-Choul Im; Zhehong Gan; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

6.  NMR experiments for the sign determination of homonuclear scalar and residual dipolar couplings.

Authors:  G Otting; M Rückert; M H Levitt; A Moshref
Journal:  J Biomol NMR       Date:  2000-04       Impact factor: 2.835

7.  Very large residual dipolar couplings from deuterated ubiquitin.

Authors:  Joshua M Ward; Nikolai R Skrynnikov
Journal:  J Biomol NMR       Date:  2012-07-25       Impact factor: 2.835

8.  Characterization of polyacrylamide-stabilized Pfl phage liquid crystals for protein NMR spectroscopy.

Authors:  Jean-François Trempe; Frederick G Morin; Zhicheng Xia; Robert H Marchessault; Kalle Gehring
Journal:  J Biomol NMR       Date:  2002-01       Impact factor: 2.835

9.  Applications of variable-angle sample spinning experiments to the measurement of scaled residual dipolar couplings and 15N CSA in soluble proteins.

Authors:  Nathalie Lancelot; Karim Elbayed; Martial Piotto
Journal:  J Biomol NMR       Date:  2005-11       Impact factor: 2.835

10.  Measurement of one and two bond N-C couplings in large proteins by TROSY-based J-modulation experiments.

Authors:  Yizhou Liu; James H Prestegard
Journal:  J Magn Reson       Date:  2009-06-17       Impact factor: 2.229

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