Literature DB >> 16272409

Analyses of SUM1-1-mediated long-range repression.

Lourdes Valenzuela1, Sunil Gangadharan, Rohinton T Kamakaka.   

Abstract

In Saccharomyces cerevisiae, local repression is promoter specific and localized to a small region on the DNA, while silencing is promoter nonspecific, encompasses large domains of chromatin, and is stably inherited for multiple generations. Sum1p is a local repressor protein that mediates repression of meiosis-specific genes in mitotic cells while the Sir proteins are long-range repressors that stably silence genes at HML, HMR, and telomeres. The SUM1-1 mutation is a dominant neomorphic mutation that enables the mutant protein to be recruited to the HMR locus and repress genes, even in the absence of the Sir proteins. In this study we show that the mutation in Sum1-1p enabled it to spread, and the native HMR barrier blocked it from spreading. Thus, like the Sir proteins, Sum1-1p was a long-range repressor, but unlike the Sir proteins, Sum1-1p-mediated repression was more promoter specific, repressing certain genes better than others. Furthermore, repression mediated by Sum1-1p was not stably maintained or inherited and we therefore propose that Sum1-1p-mediated long-range repression is related but distinct from silencing.

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Year:  2005        PMID: 16272409      PMCID: PMC1456157          DOI: 10.1534/genetics.105.050427

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  49 in total

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Review 2.  Transcriptional repression in development.

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Authors:  C A Fox; A E Ehrenhofer-Murray; S Loo; J Rine
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Authors:  D Donze; C R Adams; J Rine; R T Kamakaka
Journal:  Genes Dev       Date:  1999-03-15       Impact factor: 11.361

5.  Chromatin assembly factor I contributes to the maintenance, but not the re-establishment, of silencing at the yeast silent mating loci.

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Journal:  Genes Dev       Date:  1998-01-15       Impact factor: 11.361

6.  Swi/SNF-GCN5-dependent chromatin remodelling determines induced expression of GDH3, one of the paralogous genes responsible for ammonium assimilation and glutamate biosynthesis in Saccharomyces cerevisiae.

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7.  Sum1p, the origin recognition complex, and the spreading of a promoter-specific repressor in Saccharomyces cerevisiae.

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Journal:  Mol Cell Biol       Date:  2005-07       Impact factor: 4.272

8.  Control of replication initiation and heterochromatin formation in Saccharomyces cerevisiae by a regulator of meiotic gene expression.

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3.  tRNA Genes Affect Chromosome Structure and Function via Local Effects.

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Review 4.  The Nuts and Bolts of Transcriptionally Silent Chromatin in Saccharomyces cerevisiae.

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Journal:  Genetics       Date:  2016-08       Impact factor: 4.562

Review 5.  tRNA insulator function: insight into inheritance of transcription states?

Authors:  Jacob G Kirkland; Rohinton T Kamakaka
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6.  Nucleoporin mediated nuclear positioning and silencing of HMR.

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7.  Mediator binds to boundaries of chromosomal interaction domains and to proteins involved in DNA looping, RNA metabolism, chromatin remodeling, and actin assembly.

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  7 in total

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