Literature DB >> 16229618

Langevin dynamics of semiflexible polyelectrolytes: rod-toroid-globule-coil structures and counterion distribution.

Zhaoyang Ou1, M Muthukumar.   

Abstract

We have investigated the nature of counterion condensation on uniformly charged semiflexible polyelectrolyte chains and the concomitant configurations by monitoring the role of chain stiffness, chain length, counterion valency, and the strength of electrostatic interaction. The counterion condensation is seen to follow the adsorption process and the effective polymer charge increases with chain stiffness. Size and shape, as calculated through the radius of gyration, effective persistence length, and hydrodynamic radius, are studied. Stable coil-like, globular, folded-chain, toroidal, and rodlike configurations are possible at suitable combinations of values of chain stiffness, chain length, electrostatic interaction strength, and the valency of counterion. For high strengths of electrostatic interactions, sufficiently stiff polyelectrolytes form toroids in the presence of multivalent counterions, whereas flexible polyelectrolytes form disordered globules. The kinetic features of the nucleation and growth of toroids are monitored. Several metastable structures are found to frustrate the formation of toroids. The generic pathway involves the nucleation of one primary loop somewhere along the chain contour, followed by a growth process where the rest of the chain is folded continuously on top of the primary loop. The dependence of the average radii of toroids on the chain length is found to be roughly linear, in disagreement with existing scaling arguments.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16229618     DOI: 10.1063/1.1940054

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  13 in total

1.  Modeling competitive substitution in a polyelectrolyte complex.

Authors:  B Peng; M Muthukumar
Journal:  J Chem Phys       Date:  2015-12-28       Impact factor: 3.488

2.  Electrostatic origin of the genome packing in viruses.

Authors:  Vladimir A Belyi; M Muthukumar
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-07       Impact factor: 11.205

Review 3.  Using theory and computation to model nanoscale properties.

Authors:  George C Schatz
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-16       Impact factor: 11.205

4.  Conformational characteristics of single flexible polyelectrolyte chain.

Authors:  C G Jesudason; A P Lyubartsev; A Laaksonen
Journal:  Eur Phys J E Soft Matter       Date:  2009-11-29       Impact factor: 1.890

5.  Dependence of DNA condensation on the correlation distance between condensed counterions.

Authors:  Yanhui Liu; Wenbo Wang; Lin Hu
Journal:  J Biol Phys       Date:  2012-08-03       Impact factor: 1.365

6.  Ion-mediated nucleic acid helix-helix interactions.

Authors:  Zhi-Jie Tan; Shi-Jie Chen
Journal:  Biophys J       Date:  2006-04-28       Impact factor: 4.033

7.  Organization of associating or crosslinked actin filaments in confinement.

Authors:  Maral Adeli Koudehi; David M Rutkowski; Dimitrios Vavylonis
Journal:  Cytoskeleton (Hoboken)       Date:  2019-10-31

8.  DNA release dynamics from bioreducible poly(amido amine) polyplexes.

Authors:  Lei Wan; Yezi You; Yi Zou; David Oupický; Guangzhao Mao
Journal:  J Phys Chem B       Date:  2009-10-22       Impact factor: 2.991

9.  Characterizing DNA condensation and conformational changes in organic solvents.

Authors:  Fuyou Ke; Yen Kim Luu; Michael Hadjiargyrou; Dehai Liang
Journal:  PLoS One       Date:  2010-10-11       Impact factor: 3.240

10.  Electrostatic free energy landscapes for nucleic acid helix assembly.

Authors:  Zhi-Jie Tan; Shi-Jie Chen
Journal:  Nucleic Acids Res       Date:  2006-12-01       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.