Literature DB >> 16219701

Biological imaging by soft x-ray diffraction microscopy.

David Shapiro1, Pierre Thibault, Tobias Beetz, Veit Elser, Malcolm Howells, Chris Jacobsen, Janos Kirz, Enju Lima, Huijie Miao, Aaron M Neiman, David Sayre.   

Abstract

We have used the method of x-ray diffraction microscopy to image the complex-valued exit wave of an intact and unstained yeast cell. The images of the freeze-dried cell, obtained by using 750-eV x-rays from different angular orientations, portray several of the cell's major internal components to 30-nm resolution. The good agreement among the independently recovered structures demonstrates the accuracy of the imaging technique. To obtain the best possible reconstructions, we have implemented procedures for handling noisy and incomplete diffraction data, and we propose a method for determining the reconstructed resolution. This work represents a previously uncharacterized application of x-ray diffraction microscopy to a specimen of this complexity and provides confidence in the feasibility of the ultimate goal of imaging biological specimens at 10-nm resolution in three dimensions.

Entities:  

Mesh:

Year:  2005        PMID: 16219701      PMCID: PMC1250270          DOI: 10.1073/pnas.0503305102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

1.  Soft X-ray microscopy with a cryo scanning transmission X-ray microscope: II. Tomography.

Authors:  Y Wang; C Jacobsen; J Maser; A Osanna
Journal:  J Microsc       Date:  2000-01       Impact factor: 1.758

2.  High resolution 3D x-ray diffraction microscopy.

Authors:  Jianwei Miao; Tetsuya Ishikawa; Bart Johnson; Erik H Anderson; Barry Lai; Keith O Hodgson
Journal:  Phys Rev Lett       Date:  2002-08-06       Impact factor: 9.161

3.  Imaging whole Escherichia coli bacteria by using single-particle x-ray diffraction.

Authors:  Jianwei Miao; Keith O Hodgson; Tetsuya Ishikawa; Carolyn A Larabell; Mark A LeGros; Yoshinori Nishino
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-23       Impact factor: 11.205

4.  Phase retrieval by iterated projections.

Authors:  Veit Elser
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2003-01       Impact factor: 2.129

5.  Diffractive imaging of nonperiodic materials with future coherent X-ray sources.

Authors:  Qun Shen; Ivan Bazarov; Pierre Thibault
Journal:  J Synchrotron Radiat       Date:  2004-08-17       Impact factor: 2.616

6.  Ultrahigh-Resolution X-ray Tomography.

Authors:  W S Haddad; I McNulty; J E Trebes; E H Anderson; R A Levesque; L Yang
Journal:  Science       Date:  1994-11-18       Impact factor: 47.728

7.  Reconstruction of an object from the modulus of its Fourier transform.

Authors:  J R Fienup
Journal:  Opt Lett       Date:  1978-07-01       Impact factor: 3.776

8.  Cryo X-ray microscopy with high spatial resolution in amplitude and phase contrast.

Authors:  G Schneider
Journal:  Ultramicroscopy       Date:  1998-11       Impact factor: 2.689

9.  The relevance of dose-fractionation in tomography of radiation-sensitive specimens.

Authors:  B F McEwen; K H Downing; R M Glaeser
Journal:  Ultramicroscopy       Date:  1995-10       Impact factor: 2.689

10.  X-ray tomography generates 3-D reconstructions of the yeast, saccharomyces cerevisiae, at 60-nm resolution.

Authors:  Carolyn A Larabell; Mark A Le Gros
Journal:  Mol Biol Cell       Date:  2003-12-29       Impact factor: 4.138

View more
  64 in total

1.  Polarized X-ray scattering reveals non-crystalline orientational ordering in organic films.

Authors:  B A Collins; J E Cochran; H Yan; E Gann; C Hub; R Fink; C Wang; T Schuettfort; C R McNeill; M L Chabinyc; H Ade
Journal:  Nat Mater       Date:  2012-04-15       Impact factor: 43.841

2.  Quantitative 3D imaging of whole, unstained cells by using X-ray diffraction microscopy.

Authors:  Huaidong Jiang; Changyong Song; Chien-Chun Chen; Rui Xu; Kevin S Raines; Benjamin P Fahimian; Chien-Hung Lu; Ting-Kuo Lee; Akio Nakashima; Jun Urano; Tetsuya Ishikawa; Fuyuhiko Tamanoi; Jianwei Miao
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-04       Impact factor: 11.205

3.  Searching with iterated maps.

Authors:  V Elser; I Rankenburg; P Thibault
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-03       Impact factor: 11.205

4.  Quantitative phase tomography of Arabidopsis seeds reveals intercellular void network.

Authors:  Peter Cloetens; Régis Mache; Michel Schlenker; Silva Lerbs-Mache
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-14       Impact factor: 11.205

Review 5.  Femtosecond nanocrystallography using X-ray lasers for membrane protein structure determination.

Authors:  Petra Fromme; John C H Spence
Journal:  Curr Opin Struct Biol       Date:  2011-08       Impact factor: 6.809

6.  High numerical aperture tabletop soft x-ray diffraction microscopy with 70-nm resolution.

Authors:  Richard L Sandberg; Changyong Song; Przemyslaw W Wachulak; Daisy A Raymondson; Ariel Paul; Bagrat Amirbekian; Edwin Lee; Anne E Sakdinawat; Chan La-O-Vorakiat; Mario C Marconi; Carmen S Menoni; Margaret M Murnane; Jorge J Rocca; Henry C Kapteyn; Jianwei Miao
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-27       Impact factor: 11.205

7.  Fast and accurate propagation of coherent light.

Authors:  R D Lewis; G Beylkin; L Monzón
Journal:  Proc Math Phys Eng Sci       Date:  2013-11-08       Impact factor: 2.704

8.  Quantitative biological imaging by ptychographic x-ray diffraction microscopy.

Authors:  Klaus Giewekemeyer; Pierre Thibault; Sebastian Kalbfleisch; André Beerlink; Cameron M Kewish; Martin Dierolf; Franz Pfeiffer; Tim Salditt
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-17       Impact factor: 11.205

9.  Three-dimensional structure determination from a single view.

Authors:  Kevin S Raines; Sara Salha; Richard L Sandberg; Huaidong Jiang; Jose A Rodríguez; Benjamin P Fahimian; Henry C Kapteyn; Jincheng Du; Jianwei Miao
Journal:  Nature       Date:  2009-12-16       Impact factor: 49.962

10.  Coherent X-ray diffraction from collagenous soft tissues.

Authors:  Felisa Berenguer de la Cuesta; Marco P E Wenger; Richard J Bean; Laurent Bozec; Michael A Horton; Ian K Robinson
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-24       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.