Literature DB >> 16196614

Mechanical properties of viral capsids.

Roya Zandi1, David Reguera.   

Abstract

Viruses are known to tolerate wide ranges of pH and salt conditions and to withstand internal pressures as high as 100 atmospheres . In this paper we investigate the mechanical properties of viral capsids, calling explicit attention to the inhomogeneity of the shells that is inherent to their discrete and polyhedral nature. We calculate the distribution of stress in these capsids and analyze their response to isotropic internal pressure (arising, for instance, from genome confinement and/or osmotic activity). We compare our results with appropriate generalizations of classical (i.e., continuum) elasticity theory. We also examine competing mechanisms for viral shell failure, e.g., in-plane crack formation vs radial bursting. The biological consequences of the special stabilities and stress distributions of viral capsids are also discussed.

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Year:  2005        PMID: 16196614     DOI: 10.1103/PhysRevE.72.021917

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  51 in total

1.  Hierarchical Order Parameters for Macromolecular Assembly Simulations I: Construction and Dynamical Properties of Order Parameters.

Authors:  Abhishek Singharoy; Yuriy Sereda; Peter J Ortoleva
Journal:  J Chem Theory Comput       Date:  2012-03-13       Impact factor: 6.006

2.  The structure of elongated viral capsids.

Authors:  Antoni Luque; David Reguera
Journal:  Biophys J       Date:  2010-06-16       Impact factor: 4.033

3.  Self-Assembly of an Alphavirus Core-like Particle Is Distinguished by Strong Intersubunit Association Energy and Structural Defects.

Authors:  Joseph Che-Yen Wang; Chao Chen; Vamseedhar Rayaprolu; Suchetana Mukhopadhyay; Adam Zlotnick
Journal:  ACS Nano       Date:  2015-08-21       Impact factor: 15.881

4.  Classical nucleation theory of virus capsids.

Authors:  Roya Zandi; Paul van der Schoot; David Reguera; Willem Kegel; Howard Reiss
Journal:  Biophys J       Date:  2005-12-30       Impact factor: 4.033

5.  A precise packing sequence for self-assembled convex structures.

Authors:  Ting Chen; Zhenli Zhang; Sharon C Glotzer
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-10       Impact factor: 11.205

6.  Mechanical limits of viral capsids.

Authors:  Mathias Buenemann; Peter Lenz
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-01       Impact factor: 11.205

7.  Internal DNA pressure modifies stability of WT phage.

Authors:  Irena Ivanovska; Gijs Wuite; Bengt Jönsson; Alex Evilevitch
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-29       Impact factor: 11.205

8.  Manipulation of the mechanical properties of a virus by protein engineering.

Authors:  Carolina Carrasco; Milagros Castellanos; Pedro J de Pablo; Mauricio G Mateu
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-11       Impact factor: 11.205

9.  Geometric considerations in virus capsid size specificity, auxiliary requirements, and buckling.

Authors:  Ranjan V Mannige; Charles L Brooks
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-13       Impact factor: 11.205

10.  Vibrational dynamics of icosahedrally symmetric biomolecular assemblies compared with predictions based on continuum elasticity.

Authors:  Zheng Yang; Ivet Bahar; Michael Widom
Journal:  Biophys J       Date:  2009-06-03       Impact factor: 4.033

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