Literature DB >> 16104707

Filtered backprojection for the reconstruction of a high-resolution (4,2)D CH3-NH NOESY spectrum on a 29 kDa protein.

Brian E Coggins1, Ronald A Venters, Pei Zhou.   

Abstract

Projection-reconstruction (PR) NMR enables rapid collection of multidimensional NMR data. NOESY represents a particularly difficult challenge for currently existing reconstruction algorithms, as it requires the quantitative reconstruction of an unknown number of peaks, at full sensitivity. We have demonstrated the successful application of PR-NMR to NOESY by determining the 4D methyl/amide NOESY spectrum of a 29 kDa protein, human carbonic anhydrase II, from 2D projections, using filtered backprojection for reconstruction. Compared with a 3D control spectrum, all expected peaks were faithfully reconstructed, with correct volumes and with no artifacts. Filtered backprojection thus provides a way to obtain high-resolution 4D NOESY data in the time required for conventional 3D data collection.

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Year:  2005        PMID: 16104707     DOI: 10.1021/ja053110k

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  18 in total

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4.  PR-CALC: a program for the reconstruction of NMR spectra from projections.

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Journal:  J Biomol NMR       Date:  2006-03       Impact factor: 2.835

5.  Processing of ND NMR spectra sampled in polar coordinates: a simple Fourier transform instead of a reconstruction.

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Journal:  J Biomol NMR       Date:  2006-09-09       Impact factor: 2.835

6.  Random sampling of evolution time space and Fourier transform processing.

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Journal:  J Biomol NMR       Date:  2006-09-21       Impact factor: 2.835

7.  Sampling of the NMR time domain along concentric rings.

Authors:  Brian E Coggins; Pei Zhou
Journal:  J Magn Reson       Date:  2006-10-27       Impact factor: 2.229

8.  A HAUSDORFF-BASED NOE ASSIGNMENT ALGORITHM USING PROTEIN BACKBONE DETERMINED FROM RESIDUAL DIPOLAR COUPLINGS AND ROTAMER PATTERNS.

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Journal:  Comput Syst Bioinformatics Conf       Date:  2008

9.  High resolution 4-D spectroscopy with sparse concentric shell sampling and FFT-CLEAN.

Authors:  Brian E Coggins; Pei Zhou
Journal:  J Biomol NMR       Date:  2008-10-14       Impact factor: 2.835

10.  Spectroscopy by integration of frequency and time domain information for fast acquisition of high-resolution dark spectra.

Authors:  Yoh Matsuki; Matthew T Eddy; Judith Herzfeld
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

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