Literature DB >> 20333269

Advances in Nuclear Magnetic Resonance for Drug Discovery.

Robert Powers1.   

Abstract

BACKGROUND: Drug discovery is a complex and unpredictable endeavor with a high failure rate. Current trends in the pharmaceutical industry have exasperated these challenges and are contributing to the dramatic decline in productivity observed over the last decade. The industrialization of science by forcing the drug discovery process to adhere to assembly-line protocols is imposing unnecessary restrictions, such as short project time-lines. Recent advances in nuclear magnetic resonance are responding to these self-imposed limitations and are providing opportunities to increase the success rate of drug discovery. OBJECTIVE/
METHOD: A review of recent advancements in NMR technology that have the potential of significantly impacting and benefiting the drug discovery process will be presented. These include fast NMR data collection protocols and high-throughput protein structure determination, rapid protein-ligand co-structure determination, lead discovery using fragment-based NMR affinity screens, NMR metabolomics to monitor in vivo efficacy and toxicity for lead compounds, and the identification of new therapeutic targets through the functional annotation of proteins by FAST-NMR.
CONCLUSION: NMR is a critical component of the drug discovery process, where the versatility of the technique enables it to continually expand and evolve its role. NMR is expected to maintain this growth over the next decade with advancements in automation, speed of structure calculation, in-cell imaging techniques, and the expansion of NMR amenable targets.

Entities:  

Year:  2009        PMID: 20333269      PMCID: PMC2843924          DOI: 10.1517/17460440903232623

Source DB:  PubMed          Journal:  Expert Opin Drug Discov        ISSN: 1746-0441            Impact factor:   6.098


  221 in total

1.  How many leads from HTS?

Authors: 
Journal:  Drug Discov Today       Date:  1999-10       Impact factor: 7.851

2.  Universally conserved positions in protein folds: reading evolutionary signals about stability, folding kinetics and function.

Authors:  L A Mirny; E I Shakhnovich
Journal:  J Mol Biol       Date:  1999-08-06       Impact factor: 5.469

3.  Drug screening--beyond the bottleneck.

Authors:  A Dove
Journal:  Nat Biotechnol       Date:  1999-09       Impact factor: 54.908

4.  Small volume flow probe for automated direct-injection NMR analysis: design and performance.

Authors:  R L Haner; W Llanos; L Mueller
Journal:  J Magn Reson       Date:  2000-03       Impact factor: 2.229

5.  Applications of NMR in drug discovery.

Authors: 
Journal:  Drug Discov Today       Date:  2000-06       Impact factor: 7.851

Review 6.  Functional diversity of compound libraries.

Authors:  D Gorse; R Lahana
Journal:  Curr Opin Chem Biol       Date:  2000-06       Impact factor: 8.822

Review 7.  Chemoinformatics - similarity and diversity in chemical libraries.

Authors:  P Willett
Journal:  Curr Opin Biotechnol       Date:  2000-02       Impact factor: 9.740

Review 8.  The structure of inosine 5'-monophosphate dehydrogenase and the design of novel inhibitors.

Authors:  M D Sintchak; E Nimmesgern
Journal:  Immunopharmacology       Date:  2000-05

Review 9.  Structure-based design of a new class of anti-inflammatory drugs: secretory phospholipase A(2) inhibitors, SPI.

Authors:  E D Mihelich; R W Schevitz
Journal:  Biochim Biophys Acta       Date:  1999-11-23

10.  NMR solution structure of the catalytic fragment of human fibroblast collagenase complexed with a sulfonamide derivative of a hydroxamic acid compound.

Authors:  F J Moy; P K Chanda; J M Chen; S Cosmi; W Edris; J S Skotnicki; J Wilhelm; R Powers
Journal:  Biochemistry       Date:  1999-06-01       Impact factor: 3.162

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  12 in total

Review 1.  Application of NMR and molecular docking in structure-based drug discovery.

Authors:  Jaime L Stark; Robert Powers
Journal:  Top Curr Chem       Date:  2012

2.  A fluorinated indole-based MDM2 antagonist selectively inhibits the growth of p53wt osteosarcoma cells.

Authors:  Lukasz Skalniak; Aleksandra Twarda-Clapa; Constantinos G Neochoritis; Ewa Surmiak; Monika Machula; Aneta Wisniewska; Beata Labuzek; Ameena M Ali; Sylwia Krzanik; Grzegorz Dubin; Matthew Groves; Alexander Dömling; Tad A Holak
Journal:  FEBS J       Date:  2019-02-16       Impact factor: 5.542

Review 3.  Challenges and opportunities in absorption, distribution, metabolism, and excretion studies of therapeutic biologics.

Authors:  Xin Xu; Yulia Vugmeyster
Journal:  AAPS J       Date:  2012-08-04       Impact factor: 4.009

4.  A unified NMR strategy for high-throughput determination of backbone fold of small proteins.

Authors:  Dinesh Kumar; Anmol Gautam; Ramakrishna V Hosur
Journal:  J Struct Funct Genomics       Date:  2012-09-28

5.  An inexpensive high-throughput nuclear magnetic resonance tube cleaning apparatus.

Authors:  Bo Zhang; James Hodgson; Walter Hancock; Robert Powers
Journal:  Anal Biochem       Date:  2011-05-17       Impact factor: 3.365

6.  Virtual Screening Analysis and In-vitro Xanthine Oxidase Inhibitory Activity of Some Commercially Available Flavonoids.

Authors:  Muthuswamy Umamaheswari; Arumugam Madeswaran; Kuppusamy Asokkumar
Journal:  Iran J Pharm Res       Date:  2013       Impact factor: 1.696

7.  Research in bioanalysis and separations at the University of Nebraska - Lincoln.

Authors:  David S Hage; Eric D Dodds; Liangcheng Du; Robert Powers
Journal:  Bioanalysis       Date:  2011-05       Impact factor: 2.681

8.  Statistical removal of background signals from high-throughput (1)H NMR line-broadening ligand-affinity screens.

Authors:  Bradley Worley; Nicholas J Sisco; Robert Powers
Journal:  J Biomol NMR       Date:  2015-07-09       Impact factor: 2.835

9.  Quantitating metabolites in protein precipitated serum using NMR spectroscopy.

Authors:  G A Nagana Gowda; Daniel Raftery
Journal:  Anal Chem       Date:  2014-05-14       Impact factor: 6.986

10.  NMRmix: A Tool for the Optimization of Compound Mixtures in 1D (1)H NMR Ligand Affinity Screens.

Authors:  Jaime L Stark; Hamid R Eghbalnia; Woonghee Lee; William M Westler; John L Markley
Journal:  J Proteome Res       Date:  2016-03-23       Impact factor: 4.466

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