Literature DB >> 16044244

The RNA world on ice: a new scenario for the emergence of RNA information.

Alexander V Vlassov1, Sergei A Kazakov, Brian H Johnston, Laura F Landweber.   

Abstract

The RNA world hypothesis refers to a hypothetical era prior to coded peptide synthesis, where RNA was the major structural, genetic, and catalytic agent. Though it is a widely accepted scenario, a number of vexing difficulties remain. In this review we focus on a missing link of the RNA world hypothesis-primitive miniribozymes, in particular ligases, and discuss the role of these molecules in the evolution of RNA size and complexity. We argue that prebiotic conditions associated with freezing, rather than "warm and wet" conditions, could have been of key importance in the early RNA world.

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Year:  2005        PMID: 16044244     DOI: 10.1007/s00239-004-0362-7

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  75 in total

1.  Binding and disruption of phospholipid bilayers by supramolecular RNA complexes.

Authors:  A Vlassov; A Khvorova; M Yarus
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-26       Impact factor: 11.205

2.  RNA-catalyzed amino acid activation.

Authors:  R K Kumar; M Yarus
Journal:  Biochemistry       Date:  2001-06-19       Impact factor: 3.162

Review 3.  RNase P RNA-mediated catalysis.

Authors:  L A Kirsebom
Journal:  Biochem Soc Trans       Date:  2002-11       Impact factor: 5.407

4.  The cold origin of life: B. Implications based on pyrimidines and purines produced from frozen ammonium cyanide solutions.

Authors:  Shin Miyakawa; H James Cleaves; Stanley L Miller
Journal:  Orig Life Evol Biosph       Date:  2002-06       Impact factor: 1.950

5.  Emergence of a dual-catalytic RNA with metal-specific cleavage and ligase activities: the spandrels of RNA evolution.

Authors:  L F Landweber; I D Pokrovskaya
Journal:  Proc Natl Acad Sci U S A       Date:  1999-01-05       Impact factor: 11.205

6.  Hydration of macromolecules.

Authors:  I D Kuntz; T S Brassfield; G D Law; G V Purcell
Journal:  Science       Date:  1969-03-21       Impact factor: 47.728

7.  Reconstitution of hairpin ribozyme activity following separation of functional domains.

Authors:  S E Butcher; J E Heckman; J M Burke
Journal:  J Biol Chem       Date:  1995-12-15       Impact factor: 5.157

8.  Measurement of the repulsive force between polyelectrolyte molecules in ionic solution: hydration forces between parallel DNA double helices.

Authors:  D C Rau; B Lee; V A Parsegian
Journal:  Proc Natl Acad Sci U S A       Date:  1984-05       Impact factor: 11.205

9.  Acceleration of enzyme reactions in ice.

Authors:  N H Grant; H E Alburn
Journal:  Nature       Date:  1966-10-08       Impact factor: 49.962

Review 10.  Ribozymes: a distinct class of metalloenzymes.

Authors:  A M Pyle
Journal:  Science       Date:  1993-08-06       Impact factor: 47.728

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  20 in total

1.  Trapped water molecules are essential to structural dynamics and function of a ribozyme.

Authors:  Maria M Rhodes; Kamila Réblová; Jirí Sponer; Nils G Walter
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-24       Impact factor: 11.205

2.  Potential for mercury reduction by microbes in the high arctic.

Authors:  Alexandre J Poulain; Sinéad M Ní Chadhain; Parisa A Ariya; Marc Amyot; Edenise Garcia; Peter G C Campbell; Gerben J Zylstra; Tamar Barkay
Journal:  Appl Environ Microbiol       Date:  2007-02-09       Impact factor: 4.792

3.  Ligation of the hairpin ribozyme in cis induced by freezing and dehydration.

Authors:  Sergei A Kazakov; Svetlana V Balatskaya; Brian H Johnston
Journal:  RNA       Date:  2006-03       Impact factor: 4.942

4.  The origin of modern terrestrial life.

Authors:  Patrick Forterre; Simonetta Gribaldo
Journal:  HFSP J       Date:  2007-07-25

5.  Ligation of RNA Oligomers by the Schistosoma mansoni Hammerhead Ribozyme in Frozen Solution.

Authors:  Lively Lie; Shweta Biliya; Fredrik Vannberg; Roger M Wartell
Journal:  J Mol Evol       Date:  2016-02-20       Impact factor: 2.395

6.  Ice as a protocellular medium for RNA replication.

Authors:  James Attwater; Aniela Wochner; Vitor B Pinheiro; Alan Coulson; Philipp Holliger
Journal:  Nat Commun       Date:  2010-09-21       Impact factor: 14.919

7.  In-ice evolution of RNA polymerase ribozyme activity.

Authors:  James Attwater; Aniela Wochner; Philipp Holliger
Journal:  Nat Chem       Date:  2013-10-20       Impact factor: 24.427

Review 8.  Proposed ancestors of phage nucleic acid packaging motors (and cells).

Authors:  Philip Serwer
Journal:  Viruses       Date:  2011-07-20       Impact factor: 5.048

9.  Computer simulation on the cooperation of functional molecules during the early stages of evolution.

Authors:  Wentao Ma; Jiming Hu
Journal:  PLoS One       Date:  2012-04-13       Impact factor: 3.240

10.  The RNA world hypothesis: the worst theory of the early evolution of life (except for all the others)(a).

Authors:  Harold S Bernhardt
Journal:  Biol Direct       Date:  2012-07-13       Impact factor: 4.540

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