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Literature DB >> 15947207

Small sense and antisense RNAs derived from a telomeric retroposon family in Giardia intestinalis.

Elisabetta Ullu¹, Hugo D Lujan, Christian Tschudi.

Abstract

Sequencing of a library of small RNAs from Giardia intestinalis identified a novel class of small sense and antisense RNAs homologous to the retroposon family GilT/Genie1 that is located at certain telomeres. These small RNAs may contribute to silencing GilT expression via the RNA interference pathway.

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Year: 2005 PMID： 15947207 PMCID： PMC1151983 DOI： 10.1128/EC.4.6.1155-1157.2005

Source DB: PubMed Journal: Eukaryot Cell ISSN： 1535-9786

29 in total

1. RNA interference is mediated by 21- and 22-nucleotide RNAs.

Authors: S M Elbashir; W Lendeckel; T Tuschl
Journal: Genes Dev Date: 2001-01-15 Impact factor: 11.361

2. The rde-1 gene, RNA interference, and transposon silencing in C. elegans.

Authors: H Tabara; M Sarkissian; W G Kelly; J Fleenor; A Grishok; L Timmons; A Fire; C C Mello
Journal: Cell Date: 1999-10-15 Impact factor: 41.582

3. RNA interference in Trypanosoma brucei: cloning of small interfering RNAs provides evidence for retroposon-derived 24-26-nucleotide RNAs.

Authors: A Djikeng; H Shi; C Tschudi; E Ullu
Journal: RNA Date: 2001-11 Impact factor: 4.942

4. Three retrotransposon families in the genome of Giardia lamblia: two telomeric, one dead.

Authors: I R Arkhipova; H G Morrison
Journal: Proc Natl Acad Sci U S A Date: 2001-12-04 Impact factor: 11.205

5. RNA silencing: the genome's immune system.

Authors: Ronald H A Plasterk
Journal: Science Date: 2002-05-17 Impact factor: 47.728

6. Endogenous and silencing-associated small RNAs in plants.

Authors: Cesar Llave; Kristin D Kasschau; Maggie A Rector; James C Carrington
Journal: Plant Cell Date: 2002-07 Impact factor: 11.277

7. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors: A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal: Nature Date: 1998-02-19 Impact factor: 49.962

8. The abundance of sterile transcripts in Giardia lamblia.

Authors: H G Elmendorf; S M Singer; T E Nash
Journal: Nucleic Acids Res Date: 2001-11-15 Impact factor: 16.971

9. Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline.

Authors: A A Aravin; N M Naumova; A V Tulin; V V Vagin; Y M Rozovsky; V A Gvozdev
Journal: Curr Biol Date: 2001-07-10 Impact factor: 10.834

10. Ancient lineages of non-LTR retrotransposons in the primitive eukaryote, Giardia lamblia.

Authors: William D Burke; Harmit S Malik; Stephen M Rich; Thomas H Eickbush
Journal: Mol Biol Evol Date: 2002-05 Impact factor: 16.240

20 in total

Review 1. On the origin and functions of RNA-mediated silencing: from protists to man.

Authors: Heriberto Cerutti; J Armando Casas-Mollano
Journal: Curr Genet Date: 2006-05-12 Impact factor: 3.886

Review 2. The emerging world of small silencing RNAs in protozoan parasites.

Authors: Vanessa D Atayde; Christian Tschudi; Elisabetta Ullu
Journal: Trends Parasitol Date: 2011-04-15

Review 3. RNA interference in infectious tropical diseases.

Authors: Seokyoung Kang; Young S Hong
Journal: Korean J Parasitol Date: 2008-03 Impact factor: 1.341

Review 4. Noncoding RNA in development.

Authors: Paulo P Amaral; John S Mattick
Journal: Mamm Genome Date: 2008-10-07 Impact factor: 2.957

Review 5. RNA interference in protozoan parasites: achievements and challenges.

Authors: Nikolay G Kolev; Christian Tschudi; Elisabetta Ullu
Journal: Eukaryot Cell Date: 2011-07-15

Review 6. RNA interference in Entamoeba histolytica: implications for parasite biology and gene silencing.

Authors: Hanbang Zhang; Justine M Pompey; Upinder Singh
Journal: Future Microbiol Date: 2011-01 Impact factor: 3.165

Review 7. Small RNAs in the animal gonad: guarding genomes and guiding development.

Authors: Nelson C Lau
Journal: Int J Biochem Cell Biol Date: 2010-03-19 Impact factor: 5.085

8. High throughput genome-wide survey of small RNAs from the parasitic protists Giardia intestinalis and Trichomonas vaginalis.

Authors: Xiaowei Sylvia Chen; Lesley J Collins; Patrick J Biggs; David Penny
Journal: Genome Biol Evol Date: 2009-07-06 Impact factor: 3.416

9. Repetitive elements in parasitic protozoa.

Authors: Christine Clayton
Journal: BMC Biol Date: 2010-05-24 Impact factor: 7.431

10. Sequence, biogenesis, and function of diverse small RNA classes bound to the Piwi family proteins of Tetrahymena thermophila.

Authors: Mary T Couvillion; Suzanne R Lee; Brandon Hogstad; Colin D Malone; Leath A Tonkin; Ravi Sachidanandam; Gregory J Hannon; Kathleen Collins
Journal: Genes Dev Date: 2009-08-05 Impact factor: 11.361