Literature DB >> 21764910

RNA interference in protozoan parasites: achievements and challenges.

Nikolay G Kolev1, Christian Tschudi, Elisabetta Ullu.   

Abstract

Protozoan parasites that profoundly affect mankind represent an exceptionally diverse group of organisms, including Plasmodium, Toxoplasma, Entamoeba, Giardia, trypanosomes, and Leishmania. Despite the overwhelming impact of these parasites, there remain many aspects to be discovered about mechanisms of pathogenesis and how these organisms survive in the host. Combined with the ever-increasing availability of sequenced genomes, RNA interference (RNAi), discovered a mere 13 years ago, has enormously facilitated the analysis of gene function, especially in organisms that are not amenable to classical genetic approaches. Here we review the current status of RNAi in studies of parasitic protozoa, with special emphasis on its use as a postgenomic tool.

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Year:  2011        PMID: 21764910      PMCID: PMC3187059          DOI: 10.1128/EC.05114-11

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN: 1535-9786


  78 in total

1.  Argonaute protein in the early divergent eukaryote Trypanosoma brucei: control of small interfering RNA accumulation and retroposon transcript abundance.

Authors:  Huafang Shi; Appolinaire Djikeng; Christian Tschudi; Elisabetta Ullu
Journal:  Mol Cell Biol       Date:  2004-01       Impact factor: 4.272

2.  In vivo gene silencing in Plasmodium berghei--a mouse malaria model.

Authors:  Asif Mohmmed; Palakodeti V N Dasaradhi; Raj K Bhatnagar; Virander S Chauhan; Pawan Malhotra
Journal:  Biochem Biophys Res Commun       Date:  2003-09-26       Impact factor: 3.575

3.  Molecular biology. Amplified silencing.

Authors:  David C Baulcombe
Journal:  Science       Date:  2007-01-12       Impact factor: 47.728

Review 4.  PIWI-interacting small RNAs: the vanguard of genome defence.

Authors:  Mikiko C Siomi; Kaoru Sato; Dubravka Pezic; Alexei A Aravin
Journal:  Nat Rev Mol Cell Biol       Date:  2011-04       Impact factor: 94.444

5.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

6.  A tightly regulated inducible expression system for conditional gene knock-outs and dominant-negative genetics in Trypanosoma brucei.

Authors:  E Wirtz; S Leal; C Ochatt; G A Cross
Journal:  Mol Biochem Parasitol       Date:  1999-03-15       Impact factor: 1.759

Review 7.  RNA interference in Entamoeba histolytica: implications for parasite biology and gene silencing.

Authors:  Hanbang Zhang; Justine M Pompey; Upinder Singh
Journal:  Future Microbiol       Date:  2011-01       Impact factor: 3.165

8.  Mammalian microRNAs predominantly act to decrease target mRNA levels.

Authors:  Huili Guo; Nicholas T Ingolia; Jonathan S Weissman; David P Bartel
Journal:  Nature       Date:  2010-08-12       Impact factor: 49.962

9.  Improvements in transfection efficiency and tests of RNA interference (RNAi) approaches in the protozoan parasite Leishmania.

Authors:  Kelly A Robinson; Stephen M Beverley
Journal:  Mol Biochem Parasitol       Date:  2003-05       Impact factor: 1.759

Review 10.  Small silencing RNAs: an expanding universe.

Authors:  Megha Ghildiyal; Phillip D Zamore
Journal:  Nat Rev Genet       Date:  2009-02       Impact factor: 53.242

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  57 in total

1.  Infectious disease: Genomics decodes drug action.

Authors:  Alan H Fairlamb
Journal:  Nature       Date:  2012-02-08       Impact factor: 49.962

Review 2.  Genome mining offers a new starting point for parasitology research.

Authors:  Zhiyue Lv; Zhongdao Wu; Limei Zhang; Pengyu Ji; Yifeng Cai; Shiqi Luo; Hongxi Wang; Hao Li
Journal:  Parasitol Res       Date:  2015-01-08       Impact factor: 2.289

3.  Characterization of the Protein Tyrosine Phosphatase LmPRL-1 Secreted by Leishmania major via the Exosome Pathway.

Authors:  Sabine Leitherer; Joachim Clos; Elisabeth M Liebler-Tenorio; Ulrike Schleicher; Christian Bogdan; Didier Soulat
Journal:  Infect Immun       Date:  2017-07-19       Impact factor: 3.441

4.  Gene selective mRNA cleavage inhibits the development of Plasmodium falciparum.

Authors:  Yoann Augagneur; Donna Wesolowski; Hyun Seop Tae; Sidney Altman; Choukri Ben Mamoun
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

5.  A new strategy of RNA interference that targets heterologous sequences reveals CITFA1 as an essential component of class I transcription factor A in Trypanosoma brucei.

Authors:  Sung Hee Park; Bao N Nguyen; Justin K Kirkham; Tu N Nguyen; Arthur Günzl
Journal:  Eukaryot Cell       Date:  2014-04-11

6.  KHARON Is an Essential Cytoskeletal Protein Involved in the Trafficking of Flagellar Membrane Proteins and Cell Division in African Trypanosomes.

Authors:  Marco A Sanchez; Khoa D Tran; Jessica Valli; Sam Hobbs; Errin Johnson; Eva Gluenz; Scott M Landfear
Journal:  J Biol Chem       Date:  2016-08-03       Impact factor: 5.157

7.  Unusual noncanonical intron editing is important for tRNA splicing in Trypanosoma brucei.

Authors:  Mary Anne T Rubio; Zdeněk Paris; Kirk W Gaston; Ian M C Fleming; Paul Sample; Christopher R Trotta; Juan D Alfonzo
Journal:  Mol Cell       Date:  2013-10-03       Impact factor: 17.970

8.  ATPase activity of Plasmodium falciparum MLH is inhibited by DNA-interacting ligands and dsRNAs of MLH along with UvrD curtail malaria parasite growth.

Authors:  Mohammed Tarique; Manish Chauhan; Renu Tuteja
Journal:  Protoplasma       Date:  2016-09-14       Impact factor: 3.356

9.  A trans-spliced telomerase RNA dictates telomere synthesis in Trypanosoma brucei.

Authors:  Ranjodh Sandhu; Samantha Sanford; Shrabani Basu; Mina Park; Unnati M Pandya; Bibo Li; Kausik Chakrabarti
Journal:  Cell Res       Date:  2013-03-12       Impact factor: 25.617

10.  Identification of essential and non-essential protein kinases by a fusion PCR method for efficient production of transgenic Trypanosoma brucei.

Authors:  Christopher Merritt; Kenneth Stuart
Journal:  Mol Biochem Parasitol       Date:  2013-05-16       Impact factor: 1.759

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