Literature DB >> 15866949

Bacteriophage Mu targets the trinucleotide sequence CGG.

Dipankar Manna1, Shuang Deng, Adam M Breier, N Patrick Higgins.   

Abstract

Target specificity for bacteriophage Mu was studied using a new phage derivative that enabled cloning of Mu-host junctions from phage DNA. Insertions distributed throughout the chromosome showed no orientation bias with respect to transcription or replication polarity. Genes with a high frequency of the triplet CGG were preferred targets.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15866949      PMCID: PMC1112026          DOI: 10.1128/JB.187.10.3586-3588.2005

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  20 in total

1.  An efficient recombination system for chromosome engineering in Escherichia coli.

Authors:  D Yu; H M Ellis; E C Lee; N A Jenkins; N G Copeland; D L Court
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-23       Impact factor: 11.205

2.  Tn7 transposes proximal to DNA double-strand breaks and into regions where chromosomal DNA replication terminates.

Authors:  J E Peters; N L Craig
Journal:  Mol Cell       Date:  2000-09       Impact factor: 17.970

3.  Mu and IS1 transpositions exhibit strong orientation bias at the Escherichia coli bgl locus.

Authors:  D Manna; X Wang; N P Higgins
Journal:  J Bacteriol       Date:  2001-06       Impact factor: 3.490

4.  Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis.

Authors:  I T Paulsen; L Banerjei; G S A Myers; K E Nelson; R Seshadri; T D Read; D E Fouts; J A Eisen; S R Gill; J F Heidelberg; H Tettelin; R J Dodson; L Umayam; L Brinkac; M Beanan; S Daugherty; R T DeBoy; S Durkin; J Kolonay; R Madupu; W Nelson; J Vamathevan; B Tran; J Upton; T Hansen; J Shetty; H Khouri; T Utterback; D Radune; K A Ketchum; B A Dougherty; C M Fraser
Journal:  Science       Date:  2003-03-28       Impact factor: 47.728

5.  Tn7 recognizes transposition target structures associated with DNA replication using the DNA-binding protein TnsE.

Authors:  J E Peters; N L Craig
Journal:  Genes Dev       Date:  2001-03-15       Impact factor: 11.361

6.  Microarray analysis of transposition targets in Escherichia coli: the impact of transcription.

Authors:  Dipankar Manna; Adam M Breier; N Patrick Higgins
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-21       Impact factor: 11.205

Review 7.  The impact of prophages on bacterial chromosomes.

Authors:  Carlos Canchaya; Ghislain Fournous; Harald Brüssow
Journal:  Mol Microbiol       Date:  2004-07       Impact factor: 3.501

8.  Replication of Mu prophages lacking the central strong gyrase site.

Authors:  Martin L Pato
Journal:  Res Microbiol       Date:  2004-09       Impact factor: 3.992

9.  Versatile action of Escherichia coli ClpXP as protease or molecular chaperone for bacteriophage Mu transposition.

Authors:  J M Jones; D J Welty; H Nakai
Journal:  J Biol Chem       Date:  1998-01-02       Impact factor: 5.157

10.  Direct observation of single MuB polymers: evidence for a DNA-dependent conformational change for generating an active target complex.

Authors:  Eric C Greene; Kiyoshi Mizuuchi
Journal:  Mol Cell       Date:  2002-05       Impact factor: 17.970

View more
  11 in total

1.  Targeted insertional mutagenesis libraries for deep domain insertion profiling.

Authors:  Willow Coyote-Maestas; David Nedrud; Steffan Okorafor; Yungui He; Daniel Schmidt
Journal:  Nucleic Acids Res       Date:  2020-01-24       Impact factor: 16.971

Review 2.  Mechanisms of DNA Transposition.

Authors:  Alison B Hickman; Fred Dyda
Journal:  Microbiol Spectr       Date:  2015-04

Review 3.  Transposable Phage Mu.

Authors:  Rasika M Harshey
Journal:  Microbiol Spectr       Date:  2014-10

4.  Analysis of phage Mu DNA transposition by whole-genome Escherichia coli tiling arrays reveals a complex relationship to distribution of target selection protein B, transcription and chromosome architectural elements.

Authors:  Jun Ge; Zheng Lou; Hong Cui; Lei Shang; Rasika M Harshey
Journal:  J Biosci       Date:  2011-09       Impact factor: 1.826

5.  Deep sequencing reveals new roles for MuB in transposition immunity and target-capture, and redefines the insular Ter region of E. coli.

Authors:  David M Walker; Rasika M Harshey
Journal:  Mob DNA       Date:  2020-07-09

6.  Congruence of in vivo and in vitro insertion patterns in hot E. coli gene targets of transposable element Mu: opposing roles of MuB in target capture and integration.

Authors:  Jun Ge; Rasika M Harshey
Journal:  J Mol Biol       Date:  2008-05-20       Impact factor: 5.469

7.  Insertion site preference of Mu, Tn5, and Tn7 transposons.

Authors:  Brian Green; Christiane Bouchier; Cécile Fairhead; Nancy L Craig; Brendan P Cormack
Journal:  Mob DNA       Date:  2012-02-07

8.  Transposition Behavior Revealed by High-Resolution Description of Pseudomonas Aeruginosa Saltovirus Integration Sites.

Authors:  Gilles Vergnaud; Cédric Midoux; Yann Blouin; Maria Bourkaltseva; Victor Krylov; Christine Pourcel
Journal:  Viruses       Date:  2018-05-07       Impact factor: 5.048

9.  Diversity of transducer-like proteins (Tlps) in Campylobacter.

Authors:  Clifford Clark; Chrystal Berry; Walter Demczuk
Journal:  PLoS One       Date:  2019-03-25       Impact factor: 3.240

10.  BRED: a simple and powerful tool for constructing mutant and recombinant bacteriophage genomes.

Authors:  Laura J Marinelli; Mariana Piuri; Zuzana Swigonová; Amrita Balachandran; Lauren M Oldfield; Julia C van Kessel; Graham F Hatfull
Journal:  PLoS One       Date:  2008-12-17       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.