Literature DB >> 15853349

Solution 1H NMR characterization of the distal H-bond network and the effective axial field in the resting-state, high-spin ferric, substrate-bound complex of heme oxygenase from N. meningitidis.

Yangzhong Liu1, Xuhong Zhang, Tadashi Yoshida, Gerd N La Mar.   

Abstract

The solution (1)H 1D and 2D NMR spectra of the high-spin ferric, resting-state, substrate-bound complex of heme oxygenase, HO, from the pathological bacterium N. meningitidis have been investigated to assess the prospects for definitive assignment of hyperfine shifted and relaxed residue protons and the interpretation of those shifts in terms of the anisotropy and orientation of the paramagnetic susceptibility tensor, chi. Appropriately tailored 1D/2D NMR data, together with analyses of paramagnetic relaxation and a preliminary estimate of the magnetic anisotropy, reveal a chi that is axially anisotropic and oriented along the Fe-His vector. Together with T(-)(2) dependence of the shifts, Deltachi(ax) yields a zero-field splitting constant, D = 9.1 cm(-)(1), which is expected to serve as a very sensitive probe of H-bond interactions between the iron-ligated water and a series of distal ordered water molecules implicated in the mechanism of HO action. The side chains, Gln49 and His53, involved in the stabilization of catalytically relevant water molecules, were found to exhibit orientations rotated by 180 degrees about the beta-gamma bonds in solution relative to those in the crystal. The implication of these reorientations on the details of the distal H-bond network is discussed. The H-bond donor strengths of Gln 49 and His53 were found to respond appropriately to H-bond donor (water) versus H-bond acceptor (cyanide) iron ligands. Very slow NH exchange for the N-terminal portion of the distal helix suggest that an intrinsically "unstable" distal helix may be valid only for the C-terminal portion.

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Year:  2005        PMID: 15853349     DOI: 10.1021/ja042339h

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  7 in total

1.  Modulation of the axial water hydrogen-bonding properties by chemical modification of the substrate in resting state, substrate-bound heme oxygenase from Neisseria meningitidis; coupling to the distal H-bond network via ordered water molecules.

Authors:  Li-Hua Ma; Yangzhong Liu; Xuhong Zhang; Tadashi Yoshida; Kevin C Langry; Kevin M Smith; Gerd N La Mar
Journal:  J Am Chem Soc       Date:  2006-05-17       Impact factor: 15.419

2.  Solution 1H NMR characterization of substrate-free C. diphtheriae heme oxygenase: pertinence for determining magnetic axes in paramagnetic substrate complexes.

Authors:  Zhenming Du; Masaki Unno; Toshitaka Matsui; Masao Ikeda-Saito; Gerd N La Mar
Journal:  J Inorg Biochem       Date:  2010-07-01       Impact factor: 4.155

3.  Influence of substrate modification and C-terminal truncation on the active site structure of substrate-bound heme oxygenase from Neisseriae meningitidis. A 1H NMR study.

Authors:  Dungeng Peng; James D Satterlee; Li-Hua Ma; Jerry L Dallas; Kevin M Smith; Xuhong Zhang; Michihiko Sato; Gerd N La Mar
Journal:  Biochemistry       Date:  2011-09-21       Impact factor: 3.162

4.  1H NMR study of the magnetic properties and electronic structure of the hydroxide complex of substrate-bound heme oxygenase from Neisseria meningitidis: influence of the axial water deprotonation on the distal H-bond network.

Authors:  Li-Hua Ma; Yangzhong Liu; Xuhang Zhang; Tadashi Yoshida; Gerd N La Mar
Journal:  J Am Chem Soc       Date:  2006-05-24       Impact factor: 15.419

5.  Coupling of the distal hydrogen bond network to the exogenous ligand in substrate-bound, resting state human heme oxygenase.

Authors:  Dungeng Peng; Hiroshi Ogura; Wenfeng Zhu; Li-Hua Ma; John P Evans; Paul R Ortiz de Montellano; Gerd N La Mar
Journal:  Biochemistry       Date:  2009-12-01       Impact factor: 3.162

6.  Characterization of the spontaneous "aging" of the heme oxygenase from the pathological bacterium Neisseria meningitidis via cleavage of the C-terminus in contact with the substrate. Implications for functional studies and the crystal structure.

Authors:  Yangzhong Liu; Li-Hua Ma; Xuhong Zhang; Tadashi Yoshida; James D Satterlee; Gerd N La Mar
Journal:  Biochemistry       Date:  2006-03-28       Impact factor: 3.162

7.  1H NMR study of the effect of variable ligand on heme oxygenase electronic and molecular structure.

Authors:  Li-Hua Ma; Yangzhong Liu; Xuhong Zhang; Tadashi Yoshida; Gerd N La Mar
Journal:  J Inorg Biochem       Date:  2008-09-05       Impact factor: 4.155

  7 in total

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