Literature DB >> 19842713

Coupling of the distal hydrogen bond network to the exogenous ligand in substrate-bound, resting state human heme oxygenase.

Dungeng Peng1, Hiroshi Ogura, Wenfeng Zhu, Li-Hua Ma, John P Evans, Paul R Ortiz de Montellano, Gerd N La Mar.   

Abstract

Mammalian heme oxygenase (HO) possesses catalytically implicated distal ordered water molecules within an extended H-bond network, with one of the ordered water molecules (#1) providing a bridge between the iron-coordinated ligand and the catalytically critical Asp140, that, in turn, serves as an acceptor for the Tyr58 OH H-bond. The degree of H-bonding by the ligated water molecule and the coupling of this water molecule to the H-bond network are of current interest and are herein investigated by (1)H NMR. Two-dimensional NMR allowed sufficient assignments to provide both the H-bond strength and hyperfine shifts, the latter of which were used to quantify the magnetic anisotropy in both the ferric high-spin aquo and low-spin hydroxo complexes. The anisotropy in the aquo complex indicates that the H-bond donation to water #1 is marginally stronger than in a bacterial HO, while the anisotropy for the hydroxo complex reveals a conventional (d(xz), d(yz))(1) ground state indicative of only moderate to weak H-bond acceptance by the ligated hydroxide. Mapping out the changes of the H-bond strengths in the network during the ligated water --> hydroxide conversion by correcting for the effects of magnetic anisotropy reveals a very substantial change in H-bond strength for Tyr58 OH and lesser effects on nearby H-bonds. The effect of pH on the H-bonding network in human HO is much larger and transmitted much further from the iron than in a pathogenic bacterial HO. The implications for the HO mechanism of the H-bond of Tyr58 to Asp140 are discussed.

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Year:  2009        PMID: 19842713      PMCID: PMC3008551          DOI: 10.1021/bi901216s

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  42 in total

1.  Comparison of the heme-free and -bound crystal structures of human heme oxygenase-1.

Authors:  Latesh Lad; David J Schuller; Hideaki Shimizu; Jonathan Friedman; Huiying Li; Paul R Ortiz de Montellano; Thomas L Poulos
Journal:  J Biol Chem       Date:  2002-12-24       Impact factor: 5.157

Review 2.  Heme oxygenase: evolution, structure, and mechanism.

Authors:  Angela Wilks
Journal:  Antioxid Redox Signal       Date:  2002-08       Impact factor: 8.401

3.  Solution 1H NMR investigation of the active site molecular and electronic structures of substrate-bound, cyanide-inhibited HmuO, a bacterial heme oxygenase from Corynebacterium diphtheriae.

Authors:  Yiming Li; Ray T Syvitski; Grace C Chu; Masao Ikeda-Saito; Gerd N La Mar
Journal:  J Biol Chem       Date:  2002-12-11       Impact factor: 5.157

4.  Modulation of the axial water hydrogen-bonding properties by chemical modification of the substrate in resting state, substrate-bound heme oxygenase from Neisseria meningitidis; coupling to the distal H-bond network via ordered water molecules.

Authors:  Li-Hua Ma; Yangzhong Liu; Xuhong Zhang; Tadashi Yoshida; Kevin C Langry; Kevin M Smith; Gerd N La Mar
Journal:  J Am Chem Soc       Date:  2006-05-17       Impact factor: 15.419

5.  Oxidation of heme to beta- and delta-biliverdin by Pseudomonas aeruginosa heme oxygenase as a consequence of an unusual seating of the heme.

Authors:  Gregori A Caignan; Rahul Deshmukh; Angela Wilks; Yuhong Zeng; Hong-wei Huang; Pierre Moënne-Loccoz; Richard A Bunce; Margaret A Eastman; Mario Rivera
Journal:  J Am Chem Soc       Date:  2002-12-18       Impact factor: 15.419

6.  Solution 1H NMR of the molecular and electronic structure of the heme cavity and substrate binding pocket of high-spin ferric horseradish peroxidase: effect of His42Ala mutation.

Authors:  A Asokan; J S de Ropp; S L Newmyer; P R Ortiz de Montellano; G N La Mar
Journal:  J Am Chem Soc       Date:  2001-05-09       Impact factor: 15.419

Review 7.  Neural roles for heme oxygenase: contrasts to nitric oxide synthase.

Authors:  D E Barañano; S H Snyder
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-25       Impact factor: 11.205

8.  Disruption of an active site hydrogen bond converts human heme oxygenase-1 into a peroxidase.

Authors:  L K Lightning; H Huang ; P Moenne-Loccoz; T M Loehr; D J Schuller; T L Poulos; P R de Montellano
Journal:  J Biol Chem       Date:  2000-12-19       Impact factor: 5.157

9.  Assignment of heme resonances and determination of the electronic structures of high- and low-spin nitrophorin 2 by 1H and 13C NMR spectroscopy: an explanation of the order of heme methyl resonances in high-spin ferriheme proteins.

Authors:  Tatjana Kh Shokhireva; Nikolai V Shokhirev; F Ann Walker
Journal:  Biochemistry       Date:  2003-01-28       Impact factor: 3.162

10.  Solution NMR characterization of an unusual distal H-bond network in the active site of the cyanide-inhibited, human heme oxygenase complex of the symmetric substrate, 2,4-dimethyldeuterohemin.

Authors:  Yiming Li; Ray T Syvitski; Karine Auclair; Angela Wilks; Paul R Ortiz De Montellano; Gerd N La Mar
Journal:  J Biol Chem       Date:  2002-06-17       Impact factor: 5.157

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  3 in total

1.  Electronic properties of the highly ruffled heme bound to the heme degrading enzyme IsdI.

Authors:  Shin-ichi J Takayama; Georgia Ukpabi; Michael E P Murphy; A Grant Mauk
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-25       Impact factor: 11.205

2.  Heme and I.

Authors:  Paul R Ortiz de Montellano
Journal:  J Biol Chem       Date:  2015-07-20       Impact factor: 5.157

3.  Solution 1H NMR characterization of substrate-free C. diphtheriae heme oxygenase: pertinence for determining magnetic axes in paramagnetic substrate complexes.

Authors:  Zhenming Du; Masaki Unno; Toshitaka Matsui; Masao Ikeda-Saito; Gerd N La Mar
Journal:  J Inorg Biochem       Date:  2010-07-01       Impact factor: 4.155

  3 in total

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