Literature DB >> 18976815

1H NMR study of the effect of variable ligand on heme oxygenase electronic and molecular structure.

Li-Hua Ma1, Yangzhong Liu, Xuhong Zhang, Tadashi Yoshida, Gerd N La Mar.   

Abstract

Heme oxygenase carries out stereospecific catabolism of protohemin to yield iron, CO and biliverdin. Instability of the physiological oxy complex has necessitated the use of model ligands, of which cyanide and azide are amenable to solution NMR characterization. Since cyanide and azide are contrasting models for bound oxygen, it is of interest to characterize differences in their molecular and/or electronic structures. We report on detailed 2D NMR comparison of the azide and cyanide substrate complexes of heme oxygenase from Neisseria meningitidis, which reveals significant and widespread differences in chemical shifts between the two complexes. To differentiate molecular from electronic structural changes between the two complexes, the anisotropy and orientation of the paramagnetic susceptibility tensor were determined for the azide complex for comparison with those for the cyanide complex. Comparison of the predicted and observed dipolar shifts reveals that shift differences are strongly dominated by differences in electronic structure and do not provide any evidence for detectable differences in molecular structure or hydrogen bonding except in the immediate vicinity of the distal ligand. The readily cleaved C-terminus interacts with the active site and saturation-transfer allows difficult heme assignments in the high-spin aquo complex.

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Year:  2008        PMID: 18976815      PMCID: PMC2724318          DOI: 10.1016/j.jinorgbio.2008.08.012

Source DB:  PubMed          Journal:  J Inorg Biochem        ISSN: 0162-0134            Impact factor:   4.155


  47 in total

Review 1.  Heme oxygenase: evolution, structure, and mechanism.

Authors:  Angela Wilks
Journal:  Antioxid Redox Signal       Date:  2002-08       Impact factor: 8.401

2.  Solution 1H NMR investigation of the active site molecular and electronic structures of substrate-bound, cyanide-inhibited HmuO, a bacterial heme oxygenase from Corynebacterium diphtheriae.

Authors:  Yiming Li; Ray T Syvitski; Grace C Chu; Masao Ikeda-Saito; Gerd N La Mar
Journal:  J Biol Chem       Date:  2002-12-11       Impact factor: 5.157

3.  Oxidation of heme to beta- and delta-biliverdin by Pseudomonas aeruginosa heme oxygenase as a consequence of an unusual seating of the heme.

Authors:  Gregori A Caignan; Rahul Deshmukh; Angela Wilks; Yuhong Zeng; Hong-wei Huang; Pierre Moënne-Loccoz; Richard A Bunce; Margaret A Eastman; Mario Rivera
Journal:  J Am Chem Soc       Date:  2002-12-18       Impact factor: 15.419

Review 4.  Mechanism of heme degradation by heme oxygenase.

Authors:  T Yoshida; C T Migita
Journal:  J Inorg Biochem       Date:  2000-11       Impact factor: 4.155

5.  Crystal structure of heme oxygenase from the gram-negative pathogen Neisseria meningitidis and a comparison with mammalian heme oxygenase-1.

Authors:  D J Schuller; W Zhu; I Stojiljkovic; A Wilks; T L Poulos
Journal:  Biochemistry       Date:  2001-09-25       Impact factor: 3.162

6.  1H NMR detection of immobilized water molecules within a strong distal hydrogen-bonding network of substrate-bound human heme oxygenase-1.

Authors:  Ray T Syvitski; Yiming Li; Karine Auclair; Paul R Ortiz De Montellano; Gerd N La Mar
Journal:  J Am Chem Soc       Date:  2002-12-04       Impact factor: 15.419

7.  Disruption of an active site hydrogen bond converts human heme oxygenase-1 into a peroxidase.

Authors:  L K Lightning; H Huang ; P Moenne-Loccoz; T M Loehr; D J Schuller; T L Poulos; P R de Montellano
Journal:  J Biol Chem       Date:  2000-12-19       Impact factor: 5.157

8.  Crystal structure of rat heme oxygenase-1 in complex with heme bound to azide. Implication for regiospecific hydroxylation of heme at the alpha-meso carbon.

Authors:  Masakazu Sugishima; Hiroshi Sakamoto; Yuichiro Higashimoto; Yoshiaki Omata; Shunsuke Hayashi; Masato Noguchi; Keiichi Fukuyama
Journal:  J Biol Chem       Date:  2002-09-15       Impact factor: 5.157

9.  Solution NMR characterization of an unusual distal H-bond network in the active site of the cyanide-inhibited, human heme oxygenase complex of the symmetric substrate, 2,4-dimethyldeuterohemin.

Authors:  Yiming Li; Ray T Syvitski; Karine Auclair; Angela Wilks; Paul R Ortiz De Montellano; Gerd N La Mar
Journal:  J Biol Chem       Date:  2002-06-17       Impact factor: 5.157

10.  Solution 1H, 15N NMR spectroscopic characterization of substrate-bound, cyanide-inhibited human heme oxygenase: water occupation of the distal cavity.

Authors:  Yiming Li; Ray T Syvitski; Karine Auclair; Paul Ortiz de Montellano; Gerd N La Mar
Journal:  J Am Chem Soc       Date:  2003-11-05       Impact factor: 15.419

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  3 in total

1.  Influence of substrate modification and C-terminal truncation on the active site structure of substrate-bound heme oxygenase from Neisseriae meningitidis. A 1H NMR study.

Authors:  Dungeng Peng; James D Satterlee; Li-Hua Ma; Jerry L Dallas; Kevin M Smith; Xuhong Zhang; Michihiko Sato; Gerd N La Mar
Journal:  Biochemistry       Date:  2011-09-21       Impact factor: 3.162

2.  Role of propionates in substrate binding to heme oxygenase from Neisseria meningitidis: a nuclear magnetic resonance study.

Authors:  Dungeng Peng; Li-Hua Ma; Kevin M Smith; Xuhong Zhang; Michihiko Sato; Gerd N La Mar
Journal:  Biochemistry       Date:  2012-08-30       Impact factor: 3.162

3.  The orbital ground state of the azide-substrate complex of human heme oxygenase is an indicator of distal H-bonding: implications for the enzyme mechanism.

Authors:  Hiroshi Ogura; John P Evans; Dungeng Peng; James D Satterlee; Paul R Ortiz de Montellano; Gerd N La Mar
Journal:  Biochemistry       Date:  2009-04-14       Impact factor: 3.162

  3 in total

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