Literature DB >> 12177322

Prospecting for novel lipase genes using PCR.

Philip J L Bell1, Anwar Sunna, Moreland D Gibbs, Natalie C Curach, Helena Nevalainen, Peter L Bergquist.   

Abstract

A PCR method suitable for the isolation of lipase genes directly from environmental DNA is described. The problems associated with the low levels of similarity between lipase genes were overcome by extensive analysis of conserved regions and careful primer design. Using this method, a lipase gene (oli-lipase) was isolated directly from environmental DNA. This lipase showed less than 20% similarity with other known lipases at the amino acid level. The study also revealed that distantly related members of the alpha/beta hydrolase superfamily share similar conserved motifs with the lipases, thus making these genes targets for gene prospecting by PCR.

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Year:  2002        PMID: 12177322     DOI: 10.1099/00221287-148-8-2283

Source DB:  PubMed          Journal:  Microbiology        ISSN: 1350-0872            Impact factor:   2.777


  25 in total

1.  The application of PCR for the isolation of a lipase gene from the genomic DNA of an Antarctic microfungus.

Authors:  J Ron Bradner; Philip J L Bell; V S Junior Te'o; K M Helena Nevalainen
Journal:  Curr Genet       Date:  2003-09-17       Impact factor: 3.886

Review 2.  Acinetobacter lipases: molecular biology, biochemical properties and biotechnological potential.

Authors:  Erick A Snellman; Rita R Colwell
Journal:  J Ind Microbiol Biotechnol       Date:  2004-09-16       Impact factor: 3.346

3.  Prospecting metagenomic enzyme subfamily genes for DNA family shuffling by a novel PCR-based approach.

Authors:  Qiuyan Wang; Huili Wu; Anming Wang; Pengfei Du; Xiaolin Pei; Haifeng Li; Xiaopu Yin; Lifeng Huang; Xiaolong Xiong
Journal:  J Biol Chem       Date:  2010-10-20       Impact factor: 5.157

4.  In silico characterization of thermostable lipases.

Authors:  Debamitra Chakravorty; Saravanan Parameswaran; Vikash Kumar Dubey; Sanjukta Patra
Journal:  Extremophiles       Date:  2010-12-12       Impact factor: 2.395

5.  Identification of a novel alkaliphilic esterase active at low temperatures by screening a metagenomic library from antarctic desert soil.

Authors:  Caroline Heath; Xiao Ping Hu; S Craig Cary; Donald Cowan
Journal:  Appl Environ Microbiol       Date:  2009-05-01       Impact factor: 4.792

6.  Characterization of a thermostable lipase showing loss of secondary structure at ambient temperature.

Authors:  Pushpender Kumar Sharma; Kashmir Singh; Ranvir Singh; Neena Capalash; Azmat Ali; Owais Mohammad; Jagdeep Kaur
Journal:  Mol Biol Rep       Date:  2011-06-16       Impact factor: 2.316

7.  Isolation and characterization of a family VII esterase derived from alluvial soil metagenomic library.

Authors:  Weixin Tao; Myung Hwan Lee; Jing Wu; Nam Hee Kim; Seon-Woo Lee
Journal:  J Microbiol       Date:  2011-05-03       Impact factor: 3.422

8.  Metagenomics: Future of microbial gene mining.

Authors:  J Vakhlu; Avneet Kour Sudan; B N Johri
Journal:  Indian J Microbiol       Date:  2008-07-27       Impact factor: 2.461

Review 9.  New extremophilic lipases and esterases from metagenomics.

Authors:  Olalla López-López; Maria E Cerdán; Maria I González Siso
Journal:  Curr Protein Pept Sci       Date:  2014       Impact factor: 3.272

10.  A gene encoding a new cold-active lipase from an Antarctic isolate of Penicillium expansum.

Authors:  Suja Mohammed; Junior Te'o; Helena Nevalainen
Journal:  Curr Genet       Date:  2013-06-19       Impact factor: 3.886

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