Literature DB >> 22270890

Identification and characterization of a novel cold-adapted esterase from a metagenomic library of mountain soil.

Kyong-Cheol Ko1, Soon-Ok Rim, Yunjon Han, Bong Seok Shin, Geun-Joong Kim, Jong Hyun Choi, Jae Jun Song.   

Abstract

A novel lipolytic enzyme was isolated from a metagenomic library after demonstration of lipolytic activity on an LB agar plate containing 1% (w/v) tributyrin. A novel esterase gene (estIM1), encoding a lipolytic enzyme (EstIM1), was cloned using a shotgun method from a pFosEstIM1 clone of the metagenomic library, and the enzyme was characterized. The estIM1 gene had an open reading frame (ORF) of 936 base pairs and encoded a protein of 311 amino acids with a molecular mass 34 kDa and a pI value of 4.32. The deduced amino acid sequence was 62% identical to that of an esterase from an uncultured bacterium (ABQ11271). The amino acid sequence indicated that EstIM1 was a member of the family IV of lipolytic enzymes, all of which contain a GDSAG motif shared with similar enzymes of lactic acid microorganisms. EstIM1 was active over a temperature range of 1-50°C, at alkaline pH. The activation energy for hydrolysis of p-nitrophenyl propionate was 1.04 kcal/mol, within a temperature range of 1-40°C. The activity of EstIM1 was about 60% of maximal even at 1°C, suggesting that EstIM1 is efficiently cold-adapted. Further characterization of this cold-adapted enzyme indicated that the esterase may be very valuable in industrial applications.

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Year:  2012        PMID: 22270890     DOI: 10.1007/s10295-011-1080-y

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  40 in total

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Authors:  J L Arpigny; K E Jaeger
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2.  Exploring the unknown. The silent revolution of microbiology.

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Review 3.  Low-temperature extremophiles and their applications.

Authors:  Ricardo Cavicchioli; Khawar S Siddiqui; David Andrews; Kevin R Sowers
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Review 4.  Metagenomics: application of genomics to uncultured microorganisms.

Authors:  Jo Handelsman
Journal:  Microbiol Mol Biol Rev       Date:  2004-12       Impact factor: 11.056

5.  Isolation of novel lipolytic genes from uncultured bacteria of pond water.

Authors:  Ravi Ranjan; Amit Grover; Raj Kishor Kapardar; Rakesh Sharma
Journal:  Biochem Biophys Res Commun       Date:  2005-09-16       Impact factor: 3.575

6.  Novel cold-adapted alkaline lipase from an intertidal flat metagenome and proposal for a new family of bacterial lipases.

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Journal:  Appl Environ Microbiol       Date:  2008-10-17       Impact factor: 4.792

7.  A cold-adapted lipase of an Alaskan psychrotroph, Pseudomonas sp. strain B11-1: gene cloning and enzyme purification and characterization.

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Review 8.  Bacterial biocatalysts: molecular biology, three-dimensional structures, and biotechnological applications of lipases.

Authors:  K E Jaeger; B W Dijkstra; M T Reetz
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9.  Characterization and its potential application of two esterases derived from the arctic sediment metagenome.

Authors:  Jeong Ho Jeon; Jun-Tae Kim; Sung Gyun Kang; Jung-Hyun Lee; Sang-Jin Kim
Journal:  Mar Biotechnol (NY)       Date:  2008-09-24       Impact factor: 3.619

10.  Cloning and characterization of a new cold-active lipase from a deep-sea sediment metagenome.

Authors:  Jeong Ho Jeon; Jun-Tae Kim; Yun Jae Kim; Hyung-Kwoun Kim; Hyun Sook Lee; Sung Gyun Kang; Sang-Jin Kim; Jung-Hyun Lee
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  8 in total

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Journal:  Extremophiles       Date:  2013-12-07       Impact factor: 2.395

2.  Isolation and characterization of a metagenome-derived thermoalkaliphilic esterase with high stability over a broad pH range.

Authors:  Ji-Eun Choi; Min-A Kwon; Hye Young Na; Dae-Hyun Hahm; Jae Kwang Song
Journal:  Extremophiles       Date:  2013-09-13       Impact factor: 2.395

3.  Characterization and application of a newly synthesized 2-deoxyribose-5-phosphate aldolase.

Authors:  Zhong-Yu You; Zhi-Qiang Liu; Yu-Guo Zheng; Yin-Chu Shen
Journal:  J Ind Microbiol Biotechnol       Date:  2012-11-22       Impact factor: 3.346

4.  Characterization of three new carboxylic ester hydrolases isolated by functional screening of a forest soil metagenomic library.

Authors:  Sophie Biver; Micheline Vandenbol
Journal:  J Ind Microbiol Biotechnol       Date:  2012-11-18       Impact factor: 3.346

5.  Metagenomic Screening for Lipolytic Genes Reveals an Ecology-Clustered Distribution Pattern.

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Journal:  Front Microbiol       Date:  2022-06-10       Impact factor: 6.064

Review 6.  New extremophilic lipases and esterases from metagenomics.

Authors:  Olalla López-López; Maria E Cerdán; Maria I González Siso
Journal:  Curr Protein Pept Sci       Date:  2014       Impact factor: 3.272

7.  Est10: A Novel Alkaline Esterase Isolated from Bovine Rumen Belonging to the New Family XV of Lipolytic Enzymes.

Authors:  María Cecilia Rodríguez; Inés Loaces; Vanesa Amarelle; Daniella Senatore; Andrés Iriarte; Elena Fabiano; Francisco Noya
Journal:  PLoS One       Date:  2015-05-14       Impact factor: 3.240

8.  Characterization of a Novel Moderately Thermophilic Solvent-Tolerant Esterase Isolated From a Compost Metagenome Library.

Authors:  Ji-Min Park; Chul-Hyung Kang; Sung-Min Won; Ki-Hoon Oh; Jung-Hoon Yoon
Journal:  Front Microbiol       Date:  2020-01-24       Impact factor: 5.640

  8 in total

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