Literature DB >> 15612689

c-di-GMP displays a monovalent metal ion-dependent polymorphism.

Zhaoying Zhang1, Barbara L Gaffney, Roger A Jones.   

Abstract

Cyclic diguanosine monophosphate (c-di-GMP) is known to be an important signaling molecule that regulates the formation of bacterial biofilms. We demonstrate here by UV, CD, and NMR that it displays a surprising polymorphism that varies with the monovalent counterion and is consistent with the formation of a G-quartet structure in K+ and a stacked structure in Li+ or Na+. The ability of this rigid molecule to adopt different alignments may be important to its biological role.

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Year:  2004        PMID: 15612689     DOI: 10.1021/ja0449832

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  18 in total

1.  Catalytic mechanism of cyclic di-GMP-specific phosphodiesterase: a study of the EAL domain-containing RocR from Pseudomonas aeruginosa.

Authors:  Feng Rao; Ye Yang; Yaning Qi; Zhao-Xun Liang
Journal:  J Bacteriol       Date:  2008-03-14       Impact factor: 3.490

Review 2.  Sensing the messenger: the diverse ways that bacteria signal through c-di-GMP.

Authors:  Petya Violinova Krasteva; Krista Michelle Giglio; Holger Sondermann
Journal:  Protein Sci       Date:  2012-06-05       Impact factor: 6.725

3.  Thiophosphate analogs of c-di-GMP: impact on polymorphism.

Authors:  Jianwei Zhao; Elizabeth Veliath; Seho Kim; Barbara L Gaffney; Roger A Jones
Journal:  Nucleosides Nucleotides Nucleic Acids       Date:  2009-05       Impact factor: 1.381

4.  One-flask syntheses of c-di-GMP and the [Rp,Rp] and [Rp,Sp] thiophosphate analogues.

Authors:  Barbara L Gaffney; Elizabeth Veliath; Jianwei Zhao; Roger A Jones
Journal:  Org Lett       Date:  2010-07-16       Impact factor: 6.005

5.  One-flask synthesis of cyclic diguanosine monophosphate (c-di-GMP).

Authors:  Barbara L Gaffney; Roger A Jones
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2012-03

6.  Polymorphism of the signaling molecule c-di-GMP.

Authors:  Zhaoying Zhang; Seho Kim; Barbara L Gaffney; Roger A Jones
Journal:  J Am Chem Soc       Date:  2006-05-31       Impact factor: 15.419

7.  Convenient synthesis of a propargylated cyclic (3'-5') diguanylic acid and its "click" conjugation to a biotinylated azide.

Authors:  Andrzej Grajkowski; Jacek Cieślak; Alexei Gapeev; Christian Schindler; Serge L Beaucage
Journal:  Bioconjug Chem       Date:  2010-10-13       Impact factor: 4.774

Review 8.  Cyclic di-GMP: the first 25 years of a universal bacterial second messenger.

Authors:  Ute Römling; Michael Y Galperin; Mark Gomelsky
Journal:  Microbiol Mol Biol Rev       Date:  2013-03       Impact factor: 11.056

Review 9.  The bacterial second messenger c-di-GMP: probing interactions with protein and RNA binding partners using cyclic dinucleotide analogs.

Authors:  Carly A Shanahan; Scott A Strobel
Journal:  Org Biomol Chem       Date:  2012-10-29       Impact factor: 3.876

10.  Synthesis of biotinylated c-di-gmp and c-di-amp using click conjugation.

Authors:  Barbara L Gaffney; Nicholas D Stebbins; Roger A Jones
Journal:  Nucleosides Nucleotides Nucleic Acids       Date:  2013       Impact factor: 1.381

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