Literature DB >> 22593024

Sensing the messenger: the diverse ways that bacteria signal through c-di-GMP.

Petya Violinova Krasteva1, Krista Michelle Giglio, Holger Sondermann.   

Abstract

An intracellular second messenger unique to bacteria, c-di-GMP, has gained appreciation as a key player in adaptation and virulence strategies, such as biofilm formation, persistence, and cytotoxicity. Diguanylate cyclases containing GGDEF domains and phosphodiesterases containing either EAL or HD-GYP domains have been identified as the enzymes controlling intracellular c-di-GMP levels, yet little is known regarding signal transmission and the sensory targets for this signaling molecule. Although limited in number, identified c-di-GMP receptors in bacteria are characterized by prominent diversity and multilevel impact. In addition, c-di-GMP has been shown to have immunomodulatory effects in mammals and several eukaryotic c-di-GMP sensors have been proposed. The structural biology of c-di-GMP receptors is a rapidly developing field of research, which holds promise for the development of novel therapeutics against bacterial infections. In this review, we highlight recent advances in identifying bacterial and eukaryotic c-di-GMP signaling mechanisms and emphasize the need for mechanistic structure-function studies on confirmed signaling targets.
Copyright © 2012 The Protein Society.

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Year:  2012        PMID: 22593024      PMCID: PMC3403432          DOI: 10.1002/pro.2093

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  124 in total

1.  Hierarchical involvement of various GGDEF domain proteins in rdar morphotype development of Salmonella enterica serovar Typhimurium.

Authors:  Abdul Kader; Roger Simm; Ulrich Gerstel; Michael Morr; Ute Römling
Journal:  Mol Microbiol       Date:  2006-05       Impact factor: 3.501

Review 2.  Get the message out: cyclic-Di-GMP regulates multiple levels of flagellum-based motility.

Authors:  Alan J Wolfe; Karen L Visick
Journal:  J Bacteriol       Date:  2007-11-09       Impact factor: 3.490

Review 3.  Mechanisms of cyclic-di-GMP signaling in bacteria.

Authors:  Urs Jenal; Jacob Malone
Journal:  Annu Rev Genet       Date:  2006       Impact factor: 16.830

4.  Structure and mechanism of a bacterial light-regulated cyclic nucleotide phosphodiesterase.

Authors:  Thomas R M Barends; Elisabeth Hartmann; Julia J Griese; Thorsten Beitlich; Natalia V Kirienko; Dmitri A Ryjenkov; Jochen Reinstein; Robert L Shoeman; Mark Gomelsky; Ilme Schlichting
Journal:  Nature       Date:  2009-06-18       Impact factor: 49.962

5.  Cyclic di-GMP allosterically inhibits the CRP-like protein (Clp) of Xanthomonas axonopodis pv. citri.

Authors:  Jason L Leduc; Gary P Roberts
Journal:  J Bacteriol       Date:  2009-07-24       Impact factor: 3.490

6.  Co-regulation of Xanthomonas campestris virulence by quorum sensing and a novel two-component regulatory system RavS/RavR.

Authors:  Ya-Wen He; Calvin Boon; Lian Zhou; Lian-Hui Zhang
Journal:  Mol Microbiol       Date:  2009-02-06       Impact factor: 3.501

7.  Riboswitches in eubacteria sense the second messenger cyclic di-GMP.

Authors:  N Sudarsan; E R Lee; Z Weinberg; R H Moy; J N Kim; K H Link; R R Breaker
Journal:  Science       Date:  2008-07-18       Impact factor: 47.728

8.  Cyclic di-GMP stimulates protective innate immunity in bacterial pneumonia.

Authors:  David K R Karaolis; Michael W Newstead; Xianying Zeng; Mamoru Hyodo; Yoshihiro Hayakawa; Urvhashi Bhan; Hallie Liang; Theodore J Standiford
Journal:  Infect Immun       Date:  2007-07-23       Impact factor: 3.441

9.  Structure of BeF3- -modified response regulator PleD: implications for diguanylate cyclase activation, catalysis, and feedback inhibition.

Authors:  Paul Wassmann; Carmen Chan; Ralf Paul; Andreas Beck; Heiko Heerklotz; Urs Jenal; Tilman Schirmer
Journal:  Structure       Date:  2007-08       Impact factor: 5.006

10.  Phosphorylation-independent regulation of the diguanylate cyclase WspR.

Authors:  Nabanita De; Michelle Pirruccello; Petya Violinova Krasteva; Narae Bae; Rahul Veera Raghavan; Holger Sondermann
Journal:  PLoS Biol       Date:  2008-03-25       Impact factor: 8.029

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  53 in total

1.  Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa.

Authors:  Bruno Y Matsuyama; Petya V Krasteva; Claudine Baraquet; Caroline S Harwood; Holger Sondermann; Marcos V A S Navarro
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-28       Impact factor: 11.205

2.  Building unique bonds to fight misplaced DNA.

Authors:  Caio T Fagundes; Luke A J O'Neill
Journal:  Cell Res       Date:  2013-06-18       Impact factor: 25.617

3.  Cyclic-di-GMP and cyclic-di-AMP activate the NLRP3 inflammasome.

Authors:  Ali A Abdul-Sater; Ivan Tattoli; Lei Jin; Andrzej Grajkowski; Assaf Levi; Beverly H Koller; Irving C Allen; Serge L Beaucage; Katherine A Fitzgerald; Jenny P-Y Ting; John C Cambier; Stephen E Girardin; Christian Schindler
Journal:  EMBO Rep       Date:  2013-09-06       Impact factor: 8.807

4.  Degradation of cyclic diguanosine monophosphate by a hybrid two-component protein protects Azoarcus sp. strain CIB from toluene toxicity.

Authors:  Zaira Martín-Moldes; Blas Blázquez; Claudine Baraquet; Caroline S Harwood; María T Zamarro; Eduardo Díaz
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-31       Impact factor: 11.205

5.  Synthesis of c-di-GMP analogs with thiourea, urea, carbodiimide, and guanidinium linkages.

Authors:  Barbara L Gaffney; Roger A Jones
Journal:  Org Lett       Date:  2013-12-06       Impact factor: 6.005

6.  Crystal structure of the YajQ-family protein XC_3703 from Xanthomonas campestris pv. campestris.

Authors:  Zhixin Zhao; Zhen Wu; Jun Zhang
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-08-26       Impact factor: 1.056

Review 7.  Cyclic di-GMP: the first 25 years of a universal bacterial second messenger.

Authors:  Ute Römling; Michael Y Galperin; Mark Gomelsky
Journal:  Microbiol Mol Biol Rev       Date:  2013-03       Impact factor: 11.056

8.  The Bioactive Lipid (S)-Sebastenoic Acid Impacts Motility and Dispersion in Vibrio cholerae.

Authors:  Christopher J A Warner; Mauro Salinas; David Zamorano-Sánchez; Walter M Bray; R Scott Lokey; Fitnat H Yildiz; Roger G Linington
Journal:  Can J Chem       Date:  2017-11-10       Impact factor: 1.118

9.  Oligoribonuclease is the primary degradative enzyme for pGpG in Pseudomonas aeruginosa that is required for cyclic-di-GMP turnover.

Authors:  Mona W Orr; Gregory P Donaldson; Geoffrey B Severin; Jingxin Wang; Herman O Sintim; Christopher M Waters; Vincent T Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-24       Impact factor: 11.205

10.  Genome-Based Comparison of Cyclic Di-GMP Signaling in Pathogenic and Commensal Escherichia coli Strains.

Authors:  Tatyana L Povolotsky; Regine Hengge
Journal:  J Bacteriol       Date:  2015-08-24       Impact factor: 3.490

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