Literature DB >> 23471616

Cyclic di-GMP: the first 25 years of a universal bacterial second messenger.

Ute Römling1, Michael Y Galperin, Mark Gomelsky.   

Abstract

Twenty-five years have passed since the discovery of cyclic dimeric (3'→5') GMP (cyclic di-GMP or c-di-GMP). From the relative obscurity of an allosteric activator of a bacterial cellulose synthase, c-di-GMP has emerged as one of the most common and important bacterial second messengers. Cyclic di-GMP has been shown to regulate biofilm formation, motility, virulence, the cell cycle, differentiation, and other processes. Most c-di-GMP-dependent signaling pathways control the ability of bacteria to interact with abiotic surfaces or with other bacterial and eukaryotic cells. Cyclic di-GMP plays key roles in lifestyle changes of many bacteria, including transition from the motile to the sessile state, which aids in the establishment of multicellular biofilm communities, and from the virulent state in acute infections to the less virulent but more resilient state characteristic of chronic infectious diseases. From a practical standpoint, modulating c-di-GMP signaling pathways in bacteria could represent a new way of controlling formation and dispersal of biofilms in medical and industrial settings. Cyclic di-GMP participates in interkingdom signaling. It is recognized by mammalian immune systems as a uniquely bacterial molecule and therefore is considered a promising vaccine adjuvant. The purpose of this review is not to overview the whole body of data in the burgeoning field of c-di-GMP-dependent signaling. Instead, we provide a historic perspective on the development of the field, emphasize common trends, and illustrate them with the best available examples. We also identify unresolved questions and highlight new directions in c-di-GMP research that will give us a deeper understanding of this truly universal bacterial second messenger.

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Year:  2013        PMID: 23471616      PMCID: PMC3591986          DOI: 10.1128/MMBR.00043-12

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  477 in total

1.  CDART: protein homology by domain architecture.

Authors:  Lewis Y Geer; Michael Domrachev; David J Lipman; Stephen H Bryant
Journal:  Genome Res       Date:  2002-10       Impact factor: 9.043

2.  Identification of a Streptococcus pyogenes SF370 gene involved in production of c-di-AMP.

Authors:  Taichi Kamegaya; Kenji Kuroda; Yoshihiro Hayakawa
Journal:  Nagoya J Med Sci       Date:  2011-02       Impact factor: 1.131

3.  Type 3 fimbrial shaft (MrkA) of Klebsiella pneumoniae, but not the fimbrial adhesin (MrkD), facilitates biofilm formation.

Authors:  J Langstraat; M Bohse; S Clegg
Journal:  Infect Immun       Date:  2001-09       Impact factor: 3.441

Review 4.  Curli biogenesis and function.

Authors:  Michelle M Barnhart; Matthew R Chapman
Journal:  Annu Rev Microbiol       Date:  2006       Impact factor: 15.500

5.  Characterization of cellulose production in Escherichia coli Nissle 1917 and its biological consequences.

Authors:  Cláudia Monteiro; Inder Saxena; Xiaoda Wang; Abdul Kader; Werner Bokranz; Roger Simm; David Nobles; Milan Chromek; Annelie Brauner; R Malcolm Brown; Ute Römling
Journal:  Environ Microbiol       Date:  2009-01-23       Impact factor: 5.491

6.  Cyclic di-GMP allosterically inhibits the CRP-like protein (Clp) of Xanthomonas axonopodis pv. citri.

Authors:  Jason L Leduc; Gary P Roberts
Journal:  J Bacteriol       Date:  2009-07-24       Impact factor: 3.490

7.  Riboswitches in eubacteria sense the second messenger cyclic di-GMP.

Authors:  N Sudarsan; E R Lee; Z Weinberg; R H Moy; J N Kim; K H Link; R R Breaker
Journal:  Science       Date:  2008-07-18       Impact factor: 47.728

8.  Cyclic diguanylate inversely regulates motility and aggregation in Clostridium difficile.

Authors:  Erin B Purcell; Robert W McKee; Shonna M McBride; Christopher M Waters; Rita Tamayo
Journal:  J Bacteriol       Date:  2012-04-20       Impact factor: 3.490

9.  The helicase DDX41 recognizes the bacterial secondary messengers cyclic di-GMP and cyclic di-AMP to activate a type I interferon immune response.

Authors:  Kislay Parvatiyar; Zhiqiang Zhang; Rosane M Teles; Songying Ouyang; Yan Jiang; Shankar S Iyer; Shivam A Zaver; Mirjam Schenk; Shang Zeng; Wenwan Zhong; Zhi-Jie Liu; Robert L Modlin; Yong-jun Liu; Genhong Cheng
Journal:  Nat Immunol       Date:  2012-11-11       Impact factor: 25.606

10.  The majority of Escherichia coli mRNAs undergo post-transcriptional modification in exponentially growing cells.

Authors:  Bijoy K Mohanty; Sidney R Kushner
Journal:  Nucleic Acids Res       Date:  2006-10-12       Impact factor: 16.971

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  654 in total

Review 1.  Nature's combinatorial biosynthesis and recently engineered production of nucleoside antibiotics in Streptomyces.

Authors:  Shawn Chen; William A Kinney; Steven Van Lanen
Journal:  World J Microbiol Biotechnol       Date:  2017-03-04       Impact factor: 3.312

Review 2.  Tracking the homeostasis of second messenger cyclic-di-GMP in bacteria.

Authors:  Anushya Petchiappan; Sujay Y Naik; Dipankar Chatterji
Journal:  Biophys Rev       Date:  2020-02-15

3.  Flagellar Stators Stimulate c-di-GMP Production by Pseudomonas aeruginosa.

Authors:  Amy E Baker; Shanice S Webster; Andreas Diepold; Sherry L Kuchma; Eric Bordeleau; Judith P Armitage; George A O'Toole
Journal:  J Bacteriol       Date:  2019-08-22       Impact factor: 3.490

4.  Cyclic dinucleotides bind the C-linker of HCN4 to control channel cAMP responsiveness.

Authors:  Marco Lolicato; Annalisa Bucchi; Cristina Arrigoni; Stefano Zucca; Marco Nardini; Indra Schroeder; Katie Simmons; Marco Aquila; Dario DiFrancesco; Martino Bolognesi; Frank Schwede; Dmitry Kashin; Colin W G Fishwick; A Peter Johnson; Gerhard Thiel; Anna Moroni
Journal:  Nat Chem Biol       Date:  2014-04-28       Impact factor: 15.040

5.  A bipartite periplasmic receptor-diguanylate cyclase pair (XAC2383-XAC2382) in the bacterium Xanthomonas citri.

Authors:  Raphael D Teixeira; Cristiane R Guzzo; Santiago Justo Arévalo; Maxuel O Andrade; Josielle Abrahão; Robson F de Souza; Chuck S Farah
Journal:  J Biol Chem       Date:  2018-05-04       Impact factor: 5.157

6.  Cyclic Di-GMP receptor PlzA controls virulence gene expression through RpoS in Borrelia burgdorferi.

Authors:  Ming He; Jun-Jie Zhang; Meiping Ye; Yongliang Lou; X Frank Yang
Journal:  Infect Immun       Date:  2013-11-11       Impact factor: 3.441

7.  Identification of Functions Affecting Predator-Prey Interactions between Myxococcus xanthus and Bacillus subtilis.

Authors:  Susanne Müller; Sarah N Strack; Sarah E Ryan; Mary Shawgo; Abigail Walling; Susanna Harris; Chris Chambers; Jennifer Boddicker; John R Kirby
Journal:  J Bacteriol       Date:  2016-11-18       Impact factor: 3.490

8.  The Xanthomonas oryzae pv. oryzae PilZ Domain Proteins Function Differentially in Cyclic di-GMP Binding and Regulation of Virulence and Motility.

Authors:  Fenghuan Yang; Fang Tian; Huamin Chen; William Hutchins; Ching-Hong Yang; Chenyang He
Journal:  Appl Environ Microbiol       Date:  2015-04-24       Impact factor: 4.792

9.  Single-cell and single-molecule analysis deciphers the localization, adhesion, and mechanics of the biofilm adhesin LapA.

Authors:  Sofiane El-Kirat-Chatel; Audrey Beaussart; Chelsea D Boyd; George A O'Toole; Yves F Dufrêne
Journal:  ACS Chem Biol       Date:  2013-12-06       Impact factor: 5.100

10.  Cellulose as an architectural element in spatially structured Escherichia coli biofilms.

Authors:  Diego O Serra; Anja M Richter; Regine Hengge
Journal:  J Bacteriol       Date:  2013-10-04       Impact factor: 3.490

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