Literature DB >> 15596428

Interactions between immunoglobulin-like and catalytic modules in Clostridium thermocellum cellulosomal cellobiohydrolase CbhA.

Irina A Kataeva1, Vladimir N Uversky, John M Brewer, Florian Schubot, John P Rose, B-C Wang, Lars G Ljungdahl.   

Abstract

Cellobiohydrolase CbhA from Clostridium thermocellum cellulosome is a multi-modular protein composed starting from the N-terminus of a carbohydrate-binding module (CBM) of family 4, an immunoglobulin(Ig)-like module, a catalytic module of family 9 glycoside hydrolases (GH9), X1(1) and X1(2) modules, a CBM of family 3 and a dockerin module. Deletion of the Ig-like module from the Ig-GH9 construct results in complete inactivation of the GH9 module. The crystal structure of the Ig-GH9 module pair reveals the existence of an extensive module interface composed of over 40 amino acid residues of both modules and maintained through a large number of hydrophilic and hydrophobic interactions. To investigate the importance of these interactions between the two modules, we compared the secondary and tertiary structures and thermostabilities of the individual Ig-like and GH9 modules and the Ig-GH9 module pair using both circular dichroism (CD) spectroscopy and differential scanning calorimetry (DSC). Thr230, Asp262 and Asp264 of the Ig-like module are located in the module interface of the Ig-GH9 module pair and are suggested to be important in 'communication' between the modules. These residues were mutated to alanyl residues. The structure, stability and catalytic properties of the native Ig-GH9 and its D264A and T230A/D262A mutants were compared. The results indicate that despite being able to fold relatively independently, the Ig-like and GH9 modules interact and these interactions affect the final fold and stability of each module. Mutations of one or two amino acid residues lead to destabilization and change of the mechanism of thermal unfolding of the polypeptides. The enzymatic properties of native Ig-GH9, D264A and T230A/D262A mutants are similar. The results indicate that inactivation of the GH9 module occurs as a result of multiple structural disturbances finally affecting the topology of the catalytic center.

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Year:  2004        PMID: 15596428     DOI: 10.1093/protein/gzh094

Source DB:  PubMed          Journal:  Protein Eng Des Sel        ISSN: 1741-0126            Impact factor:   1.650


  17 in total

1.  Modeling the self-assembly of the cellulosome enzyme complex.

Authors:  Yannick J Bomble; Gregg T Beckham; James F Matthews; Mark R Nimlos; Michael E Himmel; Michael F Crowley
Journal:  J Biol Chem       Date:  2010-11-22       Impact factor: 5.157

2.  Mechanism of bacterial cell-surface attachment revealed by the structure of cellulosomal type II cohesin-dockerin complex.

Authors:  Jarrett J Adams; Gour Pal; Zongchao Jia; Steven P Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-29       Impact factor: 11.205

3.  Crystallization and preliminary diffraction studies of CBM3b of cellobiohydrolase 9A from Clostridium thermocellum.

Authors:  Sadanari Jindou; Svetlana Petkun; Linda Shimon; Edward A Bayer; Raphael Lamed; Felix Frolow
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-11-21

4.  Extending the cellulosome paradigm: the modular Clostridium thermocellum cellulosomal serpin PinA is a broad-spectrum inhibitor of subtilisin-like proteases.

Authors:  Páraic O Cuív; Rajesh Gupta; Hareshwar P Goswami; Mark Morrison
Journal:  Appl Environ Microbiol       Date:  2013-07-19       Impact factor: 4.792

5.  Characterization of all family-9 glycoside hydrolases synthesized by the cellulosome-producing bacterium Clostridium cellulolyticum.

Authors:  Julie Ravachol; Romain Borne; Chantal Tardif; Pascale de Philip; Henri-Pierre Fierobe
Journal:  J Biol Chem       Date:  2014-01-22       Impact factor: 5.157

6.  Ig-like Domain in Endoglucanase Cel9A from Alicyclobacillus acidocaldarius Makes Dependent the Enzyme Stability on Calcium.

Authors:  Mohammad Pazhang; Fereshteh S Younesi; Faramarz Mehrnejad; Saeed Najavand; Alireza Tarinejad; Mehrnaz Haghi; Fatemeh Rashno; Khosro Khajeh
Journal:  Mol Biotechnol       Date:  2018-09       Impact factor: 2.695

Review 7.  Handling gene and protein names in the age of bioinformatics: the special challenge of secreted multimodular bacterial enzymes such as the cbhA/cbh9A gene of Clostridium thermocellum.

Authors:  Wolfgang H Schwarz; Roman Brunecky; Jannis Broeker; Wolfgang Liebl; Vladimir V Zverlov
Journal:  World J Microbiol Biotechnol       Date:  2018-02-26       Impact factor: 3.312

8.  CenC, a multidomain thermostable GH9 processive endoglucanase from Clostridium thermocellum: cloning, characterization and saccharification studies.

Authors:  Ikram ul Haq; Fatima Akram; Mahmood Ali Khan; Zahid Hussain; Ali Nawaz; Kaleem Iqbal; Ali Javed Shah
Journal:  World J Microbiol Biotechnol       Date:  2015-08-07       Impact factor: 3.312

9.  Structure of endoglucanase Cel9A from the thermoacidophilic Alicyclobacillus acidocaldarius.

Authors:  Jose Henrique Pereira; Rajat Sapra; Joanne V Volponi; Carol L Kozina; Blake Simmons; Paul D Adams
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-07-10

10.  Characterization and synergistic interactions of Fibrobacter succinogenes glycoside hydrolases.

Authors:  Meng Qi; Hyun-Sik Jun; Cecil W Forsberg
Journal:  Appl Environ Microbiol       Date:  2007-07-27       Impact factor: 4.792

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