Literature DB >> 26250549

CenC, a multidomain thermostable GH9 processive endoglucanase from Clostridium thermocellum: cloning, characterization and saccharification studies.

Ikram ul Haq1, Fatima Akram2, Mahmood Ali Khan3, Zahid Hussain3, Ali Nawaz3, Kaleem Iqbal3, Ali Javed Shah3.   

Abstract

The growing demands of bioenergy has led to the emphasis on novel cellulases to improve efficiency of biodegradation process of plant biomass. Therefore, a thermostable cellulolytic gene (CenC) with 3675 bp was cloned from Clostridium thermocellum and over-expressed in Escherichia coli strain BL21 CodonPlus. It was attested that CenC belongs to glycoside hydrolase family 9 (GH9) with four binding domains, a processive endoglucanase. CenC was purified to homogeneity, producing a single band on SDS-PAGE corresponding to 137.11 kDa, by purification steps of heat treatment combined with ion-exchange chromatography. Purified enzyme displayed optimal activity at pH 6.0 and 70 °C. CenC had a half-life of 24 min at 74 °C, was stable up to 2 h at 60 °C and over a pH range of 5.5-7.5. Enzyme showed high affinity towards various substrates and processively released cellobiose from cellulosic substrates. It efficiently hydrolyzed carboxymethyl cellulose (30 U/mg), β-Glucan Barley (94 U/mg); also showed activity towards p-nitrophenyl-β-D-cellobioside (18 U/mg), birchwood xylan (19 U/mg), beechwood xylan (17.5 U/mg), avicel (9 U/mg), whatman filter paper (11 U/mg) and laminarin (3.3 U/mg). CenC exhibited Km, Vmax, Kcat, Vmax Km(-1) and Kcat Km(-1) of 7.14 mM, 52.4 µmol mg(-1) min(-1), 632.85 s(-1), 7.34 min(-1) and 88.63, respectively used CMC as substrate. Recombinant CenC saccharified pretreated wheat straw and bagasse to 5.12 and 7.31%, respectively at pH 7.0 and 45 °C after 2 h incubation. Its thermostability, high catalytic efficiency and independence of inhibitors make CenC enzyme an appropriate candidate for industrial applications and cost-effective saccharification process.

Entities:  

Keywords:  Clostridium thermocellum; Module protein; Processive endoglucanase; Saccharification; Thermostable

Mesh:

Substances:

Year:  2015        PMID: 26250549     DOI: 10.1007/s11274-015-1920-4

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  32 in total

1.  Interactions between immunoglobulin-like and catalytic modules in Clostridium thermocellum cellulosomal cellobiohydrolase CbhA.

Authors:  Irina A Kataeva; Vladimir N Uversky; John M Brewer; Florian Schubot; John P Rose; B-C Wang; Lars G Ljungdahl
Journal:  Protein Eng Des Sel       Date:  2004-12-13       Impact factor: 1.650

2.  Structure of an endoglucanase from termite, Nasutitermes takasagoensis.

Authors:  Shahram Khademi; Linda A Guarino; Hirofumi Watanabe; Gaku Tokuda; Edgar F Meyer
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-03-22

3.  Glycoside hydrolase family 9 processive endoglucanase from Clostridium phytofermentans: heterologous expression, characterization, and synergy with family 48 cellobiohydrolase.

Authors:  Xiao-Zhou Zhang; Noppadon Sathitsuksanoh; Y-H P Zhang
Journal:  Bioresour Technol       Date:  2010-03-04       Impact factor: 9.642

4.  Global gene expression patterns in Clostridium thermocellum as determined by microarray analysis of chemostat cultures on cellulose or cellobiose.

Authors:  Allison Riederer; Taichi E Takasuka; Shin-ichi Makino; David M Stevenson; Yury V Bukhman; Nathaniel L Elsen; Brian G Fox
Journal:  Appl Environ Microbiol       Date:  2010-12-17       Impact factor: 4.792

5.  Heterologous expression and characterization of a novel thermo-halotolerant endoglucanase Cel5H from Dictyoglomus thermophilum.

Authors:  Runrun Shi; Zhimin Li; Qin Ye; Jianhe Xu; Yan Liu
Journal:  Bioresour Technol       Date:  2013-05-18       Impact factor: 9.642

6.  Directed evolution of a thermophilic endoglucanase (Cel5A) into highly active Cel5A variants with an expanded temperature profile.

Authors:  Chaoning Liang; Marco Fioroni; Francisco Rodríguez-Ropero; Yanfen Xue; Ulrich Schwaneberg; Yanhe Ma
Journal:  J Biotechnol       Date:  2011-04-08       Impact factor: 3.307

7.  Processive endoglucanases mediate degradation of cellulose by Saccharophagus degradans.

Authors:  Brian J Watson; Haitao Zhang; Atkinson G Longmire; Young Hwan Moon; Steven W Hutcheson
Journal:  J Bacteriol       Date:  2009-07-17       Impact factor: 3.490

8.  Fermentation of cellulosic hydrolysates obtained by enzymatic saccharification of sugarcane bagasse pretreated by hydrothermal processing.

Authors:  Vinícius F N Silva; Priscila V Arruda; Maria G A Felipe; Adilson R Gonçalves; George J M Rocha
Journal:  J Ind Microbiol Biotechnol       Date:  2010-08-26       Impact factor: 3.346

9.  celA, another gene coding for a multidomain cellulase from the extreme thermophile Caldocellum saccharolyticum.

Authors:  V S Te'o; D J Saul; P L Bergquist
Journal:  Appl Microbiol Biotechnol       Date:  1995 May-Jun       Impact factor: 4.813

10.  Expression of endoglucanases in Pichia pastoris under control of the GAP promoter.

Authors:  Anikó Várnai; Campbell Tang; Oskar Bengtsson; Andrew Atterton; Geir Mathiesen; Vincent G H Eijsink
Journal:  Microb Cell Fact       Date:  2014-04-18       Impact factor: 5.328

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  9 in total

1.  New thermostable endoglucanase from Spirochaeta thermophila and its mutants with altered substrate preferences.

Authors:  Veera Hämäläinen; Juan De Dios Barajas-López; Yana Berlina; Rafael Álvarez-Rafael; Klara Birikh
Journal:  Appl Microbiol Biotechnol       Date:  2021-01-11       Impact factor: 4.813

2.  Expression of thermostable β-xylosidase in Escherichia coli for use in saccharification of plant biomass.

Authors:  Muhammad N Aftab; Asma Zafar; Ali R Awan
Journal:  Bioengineered       Date:  2017-01-31       Impact factor: 3.269

Review 3.  Handling gene and protein names in the age of bioinformatics: the special challenge of secreted multimodular bacterial enzymes such as the cbhA/cbh9A gene of Clostridium thermocellum.

Authors:  Wolfgang H Schwarz; Roman Brunecky; Jannis Broeker; Wolfgang Liebl; Vladimir V Zverlov
Journal:  World J Microbiol Biotechnol       Date:  2018-02-26       Impact factor: 3.312

4.  Characterization of a Theme C Glycoside Hydrolase Family 9 Endo-Beta-Glucanase from a Biogas Reactor Metagenome.

Authors:  Carola Schröder; Christin Burkhardt; Philip Busch; Georg Schirrmacher; Jörg Claren; Garabed Antranikian
Journal:  Protein J       Date:  2018-10       Impact factor: 2.371

5.  A processive GH9 family endoglucanase of Bacillus licheniformis and the role of its carbohydrate-binding domain.

Authors:  Aditi Konar; Shritama Aich; Ranaprathap Katakojwala; Supratim Datta; S Venkata Mohan
Journal:  Appl Microbiol Biotechnol       Date:  2022-08-11       Impact factor: 5.560

6.  Multiple cellobiohydrolases and cellobiose phosphorylases cooperate in the ruminal bacterium Ruminococcus albus 8 to degrade cellooligosaccharides.

Authors:  Saravanan Devendran; Ahmed M Abdel-Hamid; Anton F Evans; Michael Iakiviak; In Hyuk Kwon; Roderick I Mackie; Isaac Cann
Journal:  Sci Rep       Date:  2016-10-17       Impact factor: 4.379

7.  Efficient biomass saccharification using a novel cellobiohydrolase from Clostridium clariflavum for utilization in biofuel industry.

Authors:  Asma Zafar; Muhammad Nauman Aftab; Anam Asif; Ahmet Karadag; Liangcai Peng; Hassan Ufak Celebioglu; Muhammad Sohail Afzal; Attia Hamid; Irfana Iqbal
Journal:  RSC Adv       Date:  2021-03-01       Impact factor: 3.361

Review 8.  Cellulases from Thermophiles Found by Metagenomics.

Authors:  Juan-José Escuder-Rodríguez; María-Eugenia DeCastro; María-Esperanza Cerdán; Esther Rodríguez-Belmonte; Manuel Becerra; María-Isabel González-Siso
Journal:  Microorganisms       Date:  2018-07-10

9.  Mining the biomass deconstructing capabilities of rice yellow stem borer symbionts.

Authors:  Rahul Singh; Joseph P Bennett; Mayank Gupta; Medha Sharma; Danish Eqbal; Anna M Alessi; Adam A Dowle; Simon J McQueen-Mason; Neil C Bruce; Syed Shams Yazdani
Journal:  Biotechnol Biofuels       Date:  2019-11-08       Impact factor: 6.040

  9 in total

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