Literature DB >> 17660301

Characterization and synergistic interactions of Fibrobacter succinogenes glycoside hydrolases.

Meng Qi1, Hyun-Sik Jun, Cecil W Forsberg.   

Abstract

The objectives of this study were to characterize Fibrobacter succinogenes glycoside hydrolases from different glycoside hydrolase families and to study their synergistic interactions. The gene encoding a major endoglucanase (endoglucanase 1) of F. succinogenes S85 was identified as cel9B from the genome sequence by reference to internal amino acid sequences of the purified native enzyme. Cel9B and two other glucanases from different families, Cel5H and Cel8B, were cloned and overexpressed, and the proteins were purified and characterized. These proteins in conjunction with two predominant cellulases, Cel10A, a chloride-stimulated cellobiosidase, and Cel51A, formerly known as endoglucanase 2 (or CelF), were assayed in various combinations to assess their synergistic interactions using ball-milled cellulose. The degree of synergism ranged from 0.6 to 3.7. The two predominant endoglucanases produced by F. succinogenes, Cel9B and Cel51A, were shown to have a synergistic effect of up to 1.67. Cel10A showed little synergy in combination with Cel9B and Cel51A. Mixtures containing all the enzymes gave a higher degree of synergism than those containing two or three enzymes, which reflected the complementarity in their modes of action as well as substrate specificities.

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Year:  2007        PMID: 17660301      PMCID: PMC2075001          DOI: 10.1128/AEM.01037-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  36 in total

1.  Fibrolytic activities and cellulolytic bacterial community structure in the solid and liquid phases of rumen contents.

Authors:  B Michalet-Doreau; I Fernandez; C Peyron; L Millet; G Fonty
Journal:  Reprod Nutr Dev       Date:  2001 Mar-Apr

2.  Interactions between immunoglobulin-like and catalytic modules in Clostridium thermocellum cellulosomal cellobiohydrolase CbhA.

Authors:  Irina A Kataeva; Vladimir N Uversky; John M Brewer; Florian Schubot; John P Rose; B-C Wang; Lars G Ljungdahl
Journal:  Protein Eng Des Sel       Date:  2004-12-13       Impact factor: 1.650

3.  Catalytic properties of the cellulose-binding endoglucanase F from Fibrobacter succinogenes S85.

Authors:  S R Malburg; L M Malburg; T Liu; A H Iyo; C W Forsberg
Journal:  Appl Environ Microbiol       Date:  1997-06       Impact factor: 4.792

4.  Sequence of a cellulase gene of the thermophilic bacterium Clostridium thermocellum.

Authors:  P Béguin; P Cornet; J P Aubert
Journal:  J Bacteriol       Date:  1985-04       Impact factor: 3.490

5.  Structure of the cel-3 gene from Fibrobacter succinogenes S85 and characteristics of the encoded gene product, endoglucanase 3.

Authors:  M J McGavin; C W Forsberg; B Crosby; A W Bell; D Dignard; D Y Thomas
Journal:  J Bacteriol       Date:  1989-10       Impact factor: 3.490

6.  An endoglucanase from the anaerobic fungus Orpinomyces joyonii: characterization of the gene and its product.

Authors:  J H Liu; L B Selinger; Y J Hu; M M Moloney; K J Cheng; K A Beauchemin
Journal:  Can J Microbiol       Date:  1997-05       Impact factor: 2.419

7.  Acid hydrolysis of bacterial cellulose reveals different modes of synergistic action between cellobiohydrolase I and endoglucanase I.

Authors:  P Väljamäe; V Sild; A Nutt; G Pettersson; G Johansson
Journal:  Eur J Biochem       Date:  1999-12

8.  Measurement of protein using bicinchoninic acid.

Authors:  P K Smith; R I Krohn; G T Hermanson; A K Mallia; F H Gartner; M D Provenzano; E K Fujimoto; N M Goeke; B J Olson; D C Klenk
Journal:  Anal Biochem       Date:  1985-10       Impact factor: 3.365

9.  VITAMIN REQUIREMENTS OF SEVERAL CELLULOLYTIC RUMEN BACTERIA.

Authors:  H W SCOTT; B A DEHORITY
Journal:  J Bacteriol       Date:  1965-05       Impact factor: 3.490

10.  Outer membrane proteins of Fibrobacter succinogenes with potential roles in adhesion to cellulose and in cellulose digestion.

Authors:  Hyun-Sik Jun; Meng Qi; Joshua Gong; Emmanuel E Egbosimba; Cecil W Forsberg
Journal:  J Bacteriol       Date:  2007-07-20       Impact factor: 3.490

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  21 in total

1.  Fibrobacter communities in the gastrointestinal tracts of diverse hindgut-fermenting herbivores are distinct from those of the rumen.

Authors:  Anthony P Neumann; Caroline A McCormick; Garret Suen
Journal:  Environ Microbiol       Date:  2017-08-24       Impact factor: 5.491

2.  Novel Endotype Xanthanase from Xanthan-Degrading Microbacterium sp. Strain XT11.

Authors:  He Li; Jie Sun; Fan Yang; Xiaoyu Guo; Xinyu Zhang; Min Tao; Xiaoyi Chen; Xianzhen Li
Journal:  Appl Environ Microbiol       Date:  2019-01-09       Impact factor: 4.792

3.  A processive GH9 family endoglucanase of Bacillus licheniformis and the role of its carbohydrate-binding domain.

Authors:  Aditi Konar; Shritama Aich; Ranaprathap Katakojwala; Supratim Datta; S Venkata Mohan
Journal:  Appl Microbiol Biotechnol       Date:  2022-08-11       Impact factor: 5.560

4.  Cel9D, an atypical 1,4-beta-D-glucan glucohydrolase from Fibrobacter succinogenes: characteristics, catalytic residues, and synergistic interactions with other cellulases.

Authors:  Meng Qi; Hyun-Sik Jun; Cecil W Forsberg
Journal:  J Bacteriol       Date:  2008-01-18       Impact factor: 3.490

5.  Genomic differences between Fibrobacter succinogenes S85 and Fibrobacter intestinalis DR7, identified by suppression subtractive hybridization.

Authors:  M Qi; K E Nelson; S C Daugherty; W C Nelson; I R Hance; M Morrison; C W Forsberg
Journal:  Appl Environ Microbiol       Date:  2007-12-21       Impact factor: 4.792

6.  Processive endoglucanases mediate degradation of cellulose by Saccharophagus degradans.

Authors:  Brian J Watson; Haitao Zhang; Atkinson G Longmire; Young Hwan Moon; Steven W Hutcheson
Journal:  J Bacteriol       Date:  2009-07-17       Impact factor: 3.490

7.  Biochemical and domain analyses of FSUAxe6B, a modular acetyl xylan esterase, identify a unique carbohydrate binding module in Fibrobacter succinogenes S85.

Authors:  Shosuke Yoshida; Roderick I Mackie; Isaac K O Cann
Journal:  J Bacteriol       Date:  2009-11-06       Impact factor: 3.490

8.  Outer membrane proteins of Fibrobacter succinogenes with potential roles in adhesion to cellulose and in cellulose digestion.

Authors:  Hyun-Sik Jun; Meng Qi; Joshua Gong; Emmanuel E Egbosimba; Cecil W Forsberg
Journal:  J Bacteriol       Date:  2007-07-20       Impact factor: 3.490

9.  The complete genome sequence of Fibrobacter succinogenes S85 reveals a cellulolytic and metabolic specialist.

Authors:  Garret Suen; Paul J Weimer; David M Stevenson; Frank O Aylward; Julie Boyum; Jan Deneke; Colleen Drinkwater; Natalia N Ivanova; Natalia Mikhailova; Olga Chertkov; Lynne A Goodwin; Cameron R Currie; David Mead; Phillip J Brumm
Journal:  PLoS One       Date:  2011-04-19       Impact factor: 3.240

10.  Azospirillum genomes reveal transition of bacteria from aquatic to terrestrial environments.

Authors:  Florence Wisniewski-Dyé; Kirill Borziak; Gurusahai Khalsa-Moyers; Gladys Alexandre; Leonid O Sukharnikov; Kristin Wuichet; Gregory B Hurst; W Hayes McDonald; Jon S Robertson; Valérie Barbe; Alexandra Calteau; Zoé Rouy; Sophie Mangenot; Claire Prigent-Combaret; Philippe Normand; Mickaël Boyer; Patricia Siguier; Yves Dessaux; Claudine Elmerich; Guy Condemine; Ganisan Krishnen; Ivan Kennedy; Andrew H Paterson; Victor González; Patrick Mavingui; Igor B Zhulin
Journal:  PLoS Genet       Date:  2011-12-22       Impact factor: 5.917

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