Literature DB >> 15487986

The interaction of carbohydrate-binding modules with insoluble non-crystalline cellulose is enthalpically driven.

Alisdair B Boraston1.   

Abstract

Natural cellulose exists as a composite of cellulose forms, which can be broadly characterized as crystalline or non-crystalline. The recognition of both of these forms of cellulose by the CBMs (carbohydrate-binding modules) of microbial glycoside hydrolases is important for the efficient natural and biotechnological conversion of cellulosic biomass. The category of CBM that binds insoluble non-crystalline cellulose does so with an affinity approx. 10-20-fold greater than their affinity for cello-oligosaccharides and/or soluble polysaccharides. This phenomenon has been assumed to originate from the effects of changes in configurational entropy upon binding. The loss of configurational entropy is thought to be less profound upon binding to conformationally restrained insoluble non-crystalline cellulose, resulting in larger free energies of binding. However, using isothermal titration calorimetry, it is shown that this is not the case for the high-affinity interactions of CcCBM17 (the family 17 CBM from EngF of Clostridium cellulovorans) and BspCBM28 (the family 28 CBM from Cel5A of Bacillus species 1139) with regenerated cellulose, an insoluble preparation of primarily non-crystalline cellulose. The enhanced free energy of binding of non-crystalline cellulose relative to cello-oligosaccharides is by virtue of improved enthalpy, not entropy.

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Year:  2005        PMID: 15487986      PMCID: PMC1134719          DOI: 10.1042/BJ20041473

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  14 in total

1.  Recognition and hydrolysis of noncrystalline cellulose.

Authors:  Alisdair B Boraston; Emily Kwan; Patrick Chiu; R Antony J Warren; Douglas G Kilburn
Journal:  J Biol Chem       Date:  2002-11-08       Impact factor: 5.157

2.  Thermodynamics of oligosaccharide binding to a monoclonal antibody specific for a Salmonella O-antigen point to hydrophobic interactions in the binding site.

Authors:  B W Sigurskjold; D R Bundle
Journal:  J Biol Chem       Date:  1992-04-25       Impact factor: 5.157

3.  Statistical determination of the average values of the extinction coefficients of tryptophan and tyrosine in native proteins.

Authors:  H Mach; C R Middaugh; R V Lewis
Journal:  Anal Biochem       Date:  1992-01       Impact factor: 3.365

4.  Binding of the cellulose-binding domain of exoglucanase Cex from Cellulomonas fimi to insoluble microcrystalline cellulose is entropically driven.

Authors:  A L Creagh; E Ong; E Jervis; D G Kilburn; C A Haynes
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-29       Impact factor: 11.205

5.  Identification and glucan-binding properties of a new carbohydrate-binding module family.

Authors:  Alisdair B Boraston; Mazyar Ghaffari; R Antony J Warren; Douglas G Kilburn
Journal:  Biochem J       Date:  2002-01-01       Impact factor: 3.857

6.  C1-Cx revisited: intramolecular synergism in a cellulase.

Authors:  N Din; H G Damude; N R Gilkes; R C Miller; R A Warren; D G Kilburn
Journal:  Proc Natl Acad Sci U S A       Date:  1994-11-22       Impact factor: 11.205

7.  Recognition of cello-oligosaccharides by a family 17 carbohydrate-binding module: an X-ray crystallographic, thermodynamic and mutagenic study.

Authors:  V Notenboom; A B Boraston; P Chiu; A C Freelove; D G Kilburn; D R Rose
Journal:  J Mol Biol       Date:  2001-12-07       Impact factor: 5.469

8.  Binding specificity and thermodynamics of a family 9 carbohydrate-binding module from Thermotoga maritima xylanase 10A.

Authors:  A B Boraston; A L Creagh; M M Alam; J M Kormos; P Tomme; C A Haynes; R A Warren; D G Kilburn
Journal:  Biochemistry       Date:  2001-05-29       Impact factor: 3.162

9.  Calorimetric analysis of the binding of lectins with overlapping carbohydrate-binding ligand specificities.

Authors:  M C Chervenak; E J Toone
Journal:  Biochemistry       Date:  1995-04-25       Impact factor: 3.162

Review 10.  Carbohydrate-binding modules: fine-tuning polysaccharide recognition.

Authors:  Alisdair B Boraston; David N Bolam; Harry J Gilbert; Gideon J Davies
Journal:  Biochem J       Date:  2004-09-15       Impact factor: 3.857

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  10 in total

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Authors:  Virgínia M R Pires; Pedro M M Pereira; Joana L A Brás; Márcia Correia; Vânia Cardoso; Pedro Bule; Victor D Alves; Shabir Najmudin; Immacolata Venditto; Luís M A Ferreira; Maria João Romão; Ana Luísa Carvalho; Carlos M G A Fontes; Duarte Miguel Prazeres
Journal:  J Biol Chem       Date:  2017-02-08       Impact factor: 5.157

2.  Family 46 Carbohydrate-binding Modules Contribute to the Enzymatic Hydrolysis of Xyloglucan and β-1,3-1,4-Glucans through Distinct Mechanisms.

Authors:  Immacolata Venditto; Shabir Najmudin; Ana S Luís; Luís M A Ferreira; Kazuo Sakka; J Paul Knox; Harry J Gilbert; Carlos M G A Fontes
Journal:  J Biol Chem       Date:  2015-02-23       Impact factor: 5.157

3.  Recognition of xyloglucan by the crystalline cellulose-binding site of a family 3a carbohydrate-binding module.

Authors:  Mercedes C Hernandez-Gomez; Maja G Rydahl; Artur Rogowski; Carl Morland; Alan Cartmell; Lucy Crouch; Aurore Labourel; Carlos M G A Fontes; William G T Willats; Harry J Gilbert; J Paul Knox
Journal:  FEBS Lett       Date:  2015-07-18       Impact factor: 4.124

4.  Structural basis for entropy-driven cellulose binding by a type-A cellulose-binding module (CBM) and bacterial expansin.

Authors:  Nikolaos Georgelis; Neela H Yennawar; Daniel J Cosgrove
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-27       Impact factor: 11.205

5.  Complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition.

Authors:  Immacolata Venditto; Ana S Luis; Maja Rydahl; Julia Schückel; Vânia O Fernandes; Silvia Vidal-Melgosa; Pedro Bule; Arun Goyal; Virginia M R Pires; Catarina G Dourado; Luís M A Ferreira; Pedro M Coutinho; Bernard Henrissat; J Paul Knox; Arnaud Baslé; Shabir Najmudin; Harry J Gilbert; William G T Willats; Carlos M G A Fontes
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-13       Impact factor: 11.205

Review 6.  Structural and mechanistic fundamentals for designing of cellulases.

Authors:  Sandro R Marana
Journal:  Comput Struct Biotechnol J       Date:  2012-10-16       Impact factor: 7.271

7.  Cellulose-specific Type B carbohydrate binding modules: understanding oligomeric and non-crystalline substrate recognition mechanisms.

Authors:  Abhishek A Kognole; Christina M Payne
Journal:  Biotechnol Biofuels       Date:  2018-11-30       Impact factor: 6.040

8.  Cellulase linkers are optimized based on domain type and function: insights from sequence analysis, biophysical measurements, and molecular simulation.

Authors:  Deanne W Sammond; Christina M Payne; Roman Brunecky; Michael E Himmel; Michael F Crowley; Gregg T Beckham
Journal:  PLoS One       Date:  2012-11-06       Impact factor: 3.240

9.  A coarse-grained model for synergistic action of multiple enzymes on cellulose.

Authors:  Andrea Asztalos; Marcus Daniels; Anurag Sethi; Tongye Shen; Paul Langan; Antonio Redondo; Sandrasegaram Gnanakaran
Journal:  Biotechnol Biofuels       Date:  2012-08-01       Impact factor: 6.040

Review 10.  Three-dimensional structural aspects of protein-polysaccharide interactions.

Authors:  Masamichi Nagae; Yoshiki Yamaguchi
Journal:  Int J Mol Sci       Date:  2014-03-03       Impact factor: 5.923

  10 in total

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