Literature DB >> 26193423

Recognition of xyloglucan by the crystalline cellulose-binding site of a family 3a carbohydrate-binding module.

Mercedes C Hernandez-Gomez1, Maja G Rydahl2, Artur Rogowski3, Carl Morland3, Alan Cartmell3, Lucy Crouch3, Aurore Labourel3, Carlos M G A Fontes4, William G T Willats2, Harry J Gilbert5, J Paul Knox6.   

Abstract

Type A non-catalytic carbohydrate-binding modules (CBMs), exemplified by CtCBM3acipA, are widely believed to specifically target crystalline cellulose through entropic forces. Here we have tested the hypothesis that type A CBMs can also bind to xyloglucan (XG), a soluble β-1,4-glucan containing α-1,6-xylose side chains. CtCBM3acipA bound to xyloglucan in cell walls and arrayed on solid surfaces. Xyloglucan and cellulose were shown to bind to the same planar surface on CBM3acipA. A range of type A CBMs from different families were shown to bind to xyloglucan in solution with ligand binding driven by enthalpic changes. The nature of CBM-polysaccharide interactions is discussed.
Copyright © 2015 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  CBM3a; Carbohydrate-binding module; Crystalline cellulose; Plant cell wall; Xyloglucan

Mesh:

Substances:

Year:  2015        PMID: 26193423      PMCID: PMC5877785          DOI: 10.1016/j.febslet.2015.07.009

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  23 in total

1.  Role of hydrogen bonding in the interaction between a xylan binding module and xylan.

Authors:  H Xie; D N Bolam; T Nagy; L Szabó; A Cooper; P J Simpson; J H Lakey; M P Williamson; H J Gilbert
Journal:  Biochemistry       Date:  2001-05-15       Impact factor: 3.162

2.  Solution structure of the CBM10 cellulose binding module from Pseudomonas xylanase A.

Authors:  S Raghothama; P J Simpson; L Szabó; T Nagy; H J Gilbert; M P Williamson
Journal:  Biochemistry       Date:  2000-02-08       Impact factor: 3.162

3.  Glycoside hydrolase carbohydrate-binding modules as molecular probes for the analysis of plant cell wall polymers.

Authors:  Lesley McCartney; Harry J Gilbert; David N Bolam; Alisdair B Boraston; J Paul Knox
Journal:  Anal Biochem       Date:  2004-03-01       Impact factor: 3.365

4.  Crystal structure of a bacterial family-III cellulose-binding domain: a general mechanism for attachment to cellulose.

Authors:  J Tormo; R Lamed; A J Chirino; E Morag; E A Bayer; Y Shoham; T A Steitz
Journal:  EMBO J       Date:  1996-11-01       Impact factor: 11.598

5.  Crystalline and amorphous cellulose in the secondary walls of Arabidopsis.

Authors:  Katia Ruel; Yoshiharu Nishiyama; Jean-Paul Joseleau
Journal:  Plant Sci       Date:  2012-05-18       Impact factor: 4.729

6.  Promiscuity in ligand-binding: The three-dimensional structure of a Piromyces carbohydrate-binding module, CBM29-2, in complex with cello- and mannohexaose.

Authors:  Simon J Charnock; David N Bolam; Didier Nurizzo; Lóránd Szabó; Vincent A McKie; Harry J Gilbert; Gideon J Davies
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-21       Impact factor: 11.205

Review 7.  Carbohydrate-binding modules: fine-tuning polysaccharide recognition.

Authors:  Alisdair B Boraston; David N Bolam; Harry J Gilbert; Gideon J Davies
Journal:  Biochem J       Date:  2004-09-15       Impact factor: 3.857

8.  Resin embedding, sectioning, and immunocytochemical analyses of plant cell walls in hard tissues.

Authors:  Kieran J D Lee; J Paul Knox
Journal:  Methods Mol Biol       Date:  2014

9.  Characterization and three-dimensional structures of two distinct bacterial xyloglucanases from families GH5 and GH12.

Authors:  Tracey M Gloster; Farid M Ibatullin; Katherine Macauley; Jens M Eklöf; Shirley Roberts; Johan P Turkenburg; Mads E Bjørnvad; Per Linå Jørgensen; Steffen Danielsen; Katja S Johansen; Torben V Borchert; Keith S Wilson; Harry Brumer; Gideon J Davies
Journal:  J Biol Chem       Date:  2007-03-21       Impact factor: 5.157

10.  The carbohydrate-active enzymes database (CAZy) in 2013.

Authors:  Vincent Lombard; Hemalatha Golaconda Ramulu; Elodie Drula; Pedro M Coutinho; Bernard Henrissat
Journal:  Nucleic Acids Res       Date:  2013-11-21       Impact factor: 16.971

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  16 in total

1.  Golgi-localized exo-β1,3-galactosidases involved in cell expansion and root growth in Arabidopsis.

Authors:  Pieter Nibbering; Bent L Petersen; Mohammed Saddik Motawia; Bodil Jørgensen; Peter Ulvskov; Totte Niittylä
Journal:  J Biol Chem       Date:  2020-06-03       Impact factor: 5.157

Review 2.  Monitoring Polysaccharide Dynamics in the Plant Cell Wall.

Authors:  Cătălin Voiniciuc; Markus Pauly; Björn Usadel
Journal:  Plant Physiol       Date:  2018-02-27       Impact factor: 8.340

3.  Stability and Ligand Promiscuity of Type A Carbohydrate-binding Modules Are Illustrated by the Structure of Spirochaeta thermophila StCBM64C.

Authors:  Virgínia M R Pires; Pedro M M Pereira; Joana L A Brás; Márcia Correia; Vânia Cardoso; Pedro Bule; Victor D Alves; Shabir Najmudin; Immacolata Venditto; Luís M A Ferreira; Maria João Romão; Ana Luísa Carvalho; Carlos M G A Fontes; Duarte Miguel Prazeres
Journal:  J Biol Chem       Date:  2017-02-08       Impact factor: 5.157

4.  Characterization and homology modelling of a novel multi-modular and multi-functional Paenibacillus mucilaginosus glycoside hydrolase.

Authors:  Ntsoaki Leticia Mosina; Wolf-Dieter Schubert; Don A Cowan
Journal:  Extremophiles       Date:  2019-08-01       Impact factor: 2.395

5.  Metabolism of polysaccharides in dynamic middle lamellae during cotton fibre development.

Authors:  Xiaoyuan Guo; Jean-Luc Runavot; Stéphane Bourot; Frank Meulewaeter; Mercedes Hernandez-Gomez; Claire Holland; Jesper Harholt; William G T Willats; Jozef Mravec; Paul Knox; Peter Ulvskov
Journal:  Planta       Date:  2019-02-08       Impact factor: 4.116

6.  Multitarget Immunohistochemistry for Confocal and Super-resolution Imaging of Plant Cell Wall Polysaccharides.

Authors:  Kalina T Haas; Methieu Rivière; Raymond Wightman; Alexis Peaucelle
Journal:  Bio Protoc       Date:  2020-10-05

7.  Distribution of cell-wall polysaccharides and proteins during growth of the hemp hypocotyl.

Authors:  Marc Behr; Claudia Faleri; Jean-Francois Hausman; Sébastien Planchon; Jenny Renaut; Giampiero Cai; Gea Guerriero
Journal:  Planta       Date:  2019-07-27       Impact factor: 4.540

8.  Auxin treatment of grapevine (Vitis vinifera L.) berries delays ripening onset by inhibiting cell expansion.

Authors:  Silvia Dal Santo; Matthew R Tucker; Hwei-Ting Tan; Crista A Burbidge; Marianna Fasoli; Christine Böttcher; Paul K Boss; Mario Pezzotti; Christopher Davies
Journal:  Plant Mol Biol       Date:  2020-02-10       Impact factor: 4.076

9.  Using Carbohydrate Interaction Assays to Reveal Novel Binding Sites in Carbohydrate Active Enzymes.

Authors:  Darrell Cockburn; Casper Wilkens; Adiphol Dilokpimol; Hiroyuki Nakai; Anna Lewińska; Maher Abou Hachem; Birte Svensson
Journal:  PLoS One       Date:  2016-08-09       Impact factor: 3.240

Review 10.  Report on the Current Inventory of the Toolbox for Plant Cell Wall Analysis: Proteinaceous and Small Molecular Probes.

Authors:  Maja G Rydahl; Aleksander R Hansen; Stjepan K Kračun; Jozef Mravec
Journal:  Front Plant Sci       Date:  2018-05-03       Impact factor: 5.753

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