Literature DB >> 11371185

Binding specificity and thermodynamics of a family 9 carbohydrate-binding module from Thermotoga maritima xylanase 10A.

A B Boraston1, A L Creagh, M M Alam, J M Kormos, P Tomme, C A Haynes, R A Warren, D G Kilburn.   

Abstract

The C-terminal family 9 carbohydrate-binding module of xylanase 10A from Thermotoga maritima (CBM9-2) binds to amorphous cellulose, crystalline cellulose, and the insoluble fraction of oat spelt xylan. The association constants (K(a)) for adsorption to insoluble polysaccharides are 1 x 10(5) to 3 x 10(5) M(-1). Of the soluble polysaccharides tested, CBM9-2 binds to barley beta-glucan, xyloglucan, and xylan. CBM9-2 binds specifically to the reducing ends of cellulose and soluble polysaccharides, a property that is currently unique to this CBM. CBM9-2 also binds glucose, xylose, galactose, arabinose, cellooligosaccharides, xylooligosaccharides, maltose, and lactose, with affinities ranging from 10(3) M(-1) for monosaccharides to 10(6) M(-1) for disaccharides and oligosaccharides. Cellooligosaccharides longer than two glucose units do not bind with improved affinity, indicating that cellobiose is sufficient to occupy the entire binding site. In general, the binding reaction is dominated by favorable changes in enthalpy, which are partially compensated by unfavorable entropy changes.

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Year:  2001        PMID: 11371185     DOI: 10.1021/bi0101695

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  34 in total

1.  Cloning, expression, and cell surface localization of Paenibacillus sp. strain W-61 xylanase 5, a multidomain xylanase.

Authors:  Yasuko Ito; Toshio Tomita; Narayan Roy; Akito Nakano; Noriko Sugawara-Tomita; Seiji Watanabe; Naoko Okai; Naoki Abe; Yoshiyuki Kamio
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

2.  The interaction of carbohydrate-binding modules with insoluble non-crystalline cellulose is enthalpically driven.

Authors:  Alisdair B Boraston
Journal:  Biochem J       Date:  2005-01-15       Impact factor: 3.857

3.  Oriented immobilization of bacteriophages for biosensor applications.

Authors:  M Tolba; O Minikh; L Y Brovko; S Evoy; M W Griffiths
Journal:  Appl Environ Microbiol       Date:  2009-11-30       Impact factor: 4.792

4.  The role of carbohydrate-binding module (CBM) repeat of a multimodular xylanase (XynX) from Clostridium thermocellum in cellulose and xylan binding.

Authors:  Thangaswamy Selvaraj; Sung Kyum Kim; Yong Ho Kim; Yu Seok Jeong; Yu-Jeong Kim; Nguyen Dinh Phuong; Kyung Hwa Jung; Jungho Kim; Han Dae Yun; Hoon Kim
Journal:  J Microbiol       Date:  2011-01-09       Impact factor: 3.422

5.  Modular glucuronoxylan-specific xylanase with a family CBM35 carbohydrate-binding module.

Authors:  Susana Valeria Valenzuela; Pilar Diaz; F I Javier Pastor
Journal:  Appl Environ Microbiol       Date:  2012-03-23       Impact factor: 4.792

6.  Molecular and biochemical characterization of a new alkaline active multidomain xylanase from alkaline wastewater sludge.

Authors:  Yanyu Zhao; Kun Meng; Huiying Luo; Huoqing Huang; Tiezheng Yuan; Peilong Yang; Bin Yao
Journal:  World J Microbiol Biotechnol       Date:  2012-11-02       Impact factor: 3.312

7.  Growth modulation effects of CBM2a under the control of AtEXP4 and CaMV35S promoters in Arabidopsis thaliana, Nicotiana tabacum and Eucalyptus camaldulensis.

Authors:  Pornthep Keadtidumrongkul; Anongpat Suttangkakul; Phitsanu Pinmanee; Kanokwan Pattana; Chokchai Kittiwongwattana; Somsak Apisitwanich; Supachai Vuttipongchaikij
Journal:  Transgenic Res       Date:  2017-03-27       Impact factor: 2.788

8.  A comprehensive toolkit of plant cell wall glycan-directed monoclonal antibodies.

Authors:  Sivakumar Pattathil; Utku Avci; David Baldwin; Alton G Swennes; Janelle A McGill; Zoë Popper; Tracey Bootten; Anathea Albert; Ruth H Davis; Chakravarthy Chennareddy; Ruihua Dong; Beth O'Shea; Ray Rossi; Christine Leoff; Glenn Freshour; Rajesh Narra; Malcolm O'Neil; William S York; Michael G Hahn
Journal:  Plant Physiol       Date:  2010-04-02       Impact factor: 8.340

9.  Identification and glucan-binding properties of a new carbohydrate-binding module family.

Authors:  Alisdair B Boraston; Mazyar Ghaffari; R Antony J Warren; Douglas G Kilburn
Journal:  Biochem J       Date:  2002-01-01       Impact factor: 3.857

10.  Substrate binding by a bacterial ABC transporter involved in polysaccharide export.

Authors:  Leslie Cuthbertson; Matthew S Kimber; Chris Whitfield
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-21       Impact factor: 11.205

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