Literature DB >> 1547326

More than two pyrrole tautomers of mesoporphyrin stabilized by a protein. High resolution optical spectroscopic study.

J Fidy1, J M Vanderkooi, J Zollfrank, J Friedrich.   

Abstract

Mesoporphyrin IX substituted horseradish peroxidase was studied by fluorescence line narrowing and hole burning techniques at cryogenic temperatures. The spectral data reveal that four pyrrole tautomeric configurations of the chromophore are populated within the protein under the influence of irradiation and/or thermal treatment, and the existence of a fifth and a sixth tautomeric configuration is also likely. The relative population of the tautomers changes upon deuterium substitution through modification of the phototransition rate, and also depends on pH, which changes the protonation of neighboring amino acids in the heme pocket. The energy separation of the origins of the tautomers is approximately 100 cm-1. The distribution of barrier heights separating the different tautomeric forms in the ground state and their distribution was determined by temperature cycling hole burning. The distributions can be approximated by Gaussians. The experiment directly yields the distributions on a relative temperature scale, and a model is presented to transform the barrier heights into energy values. It is suggested that the energies for the tautomers are split partially due to the protein crystal field and that the trapping of the tautomeric forms is the consequence of interactions with neighboring amino acids within the heme pocket.

Entities:  

Mesh:

Substances:

Year:  1992        PMID: 1547326      PMCID: PMC1260254          DOI: 10.1016/S0006-3495(92)81844-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  13 in total

1.  Distribution of barrier heights in amorphous organic materials.

Authors: 
Journal:  Phys Rev Lett       Date:  1987-11-09       Impact factor: 9.161

2.  A model of protein conformational substates.

Authors:  D L Stein
Journal:  Proc Natl Acad Sci U S A       Date:  1985-06       Impact factor: 11.205

3.  Temperature-derivative spectroscopy: a tool for protein dynamics.

Authors:  J Berendzen; D Braunstein
Journal:  Proc Natl Acad Sci U S A       Date:  1990-01       Impact factor: 11.205

4.  Thermal irreversibility in optically labeled low-temperature glasses.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1989-03-15

5.  Conformational barriers in low-temperature proteins and glasses.

Authors: 
Journal:  Phys Rev A Gen Phys       Date:  1988-01-15

6.  Site-selected fluorescence spectra of porphyrin derivatives of heme proteins.

Authors:  J M Vanderkooi; V T Moy; G Maniara; H Koloczek; K G Paul
Journal:  Biochemistry       Date:  1985-12-31       Impact factor: 3.162

7.  Resolved fluorescence emission spectra of iron-free cytochrome c.

Authors:  P J Angiolillo; J S Leigh; J M Vanderkooi
Journal:  Photochem Photobiol       Date:  1982-08       Impact factor: 3.421

8.  Differences in the binding of aromatic substrates to horseradish peroxidase revealed by fluorescence line narrowing.

Authors:  J Fidy; K G Paul; J M Vanderkooi
Journal:  Biochemistry       Date:  1989-09-19       Impact factor: 3.162

9.  Conformational relaxation of a low-temperature protein as probed by photochemical hole burning. Horseradish peroxidase.

Authors:  J Zollfrank; J Friedrich; J M Vanderkooi; J Fidy
Journal:  Biophys J       Date:  1991-02       Impact factor: 4.033

10.  Dynamics of ligand binding to myoglobin.

Authors:  R H Austin; K W Beeson; L Eisenstein; H Frauenfelder; I C Gunsalus
Journal:  Biochemistry       Date:  1975-12-02       Impact factor: 3.162

View more
  8 in total

1.  Spectral hole burning and selection of conformational substates in chromoproteins.

Authors:  J Friedrich; J Gafert; J Zollfrank; J Vanderkooi; J Fidy
Journal:  Proc Natl Acad Sci U S A       Date:  1994-02-01       Impact factor: 11.205

2.  Vibronic energy map and excited state vibrational characteristics of magnesium myoglobin determined by energy-selective fluorescence.

Authors:  A D Kaposi; J M Vanderkooi
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-01       Impact factor: 11.205

3.  Softening of the packing density of horseradish peroxidase by a H-donor bound near the heme pocket.

Authors:  J Fidy; J M Vanderkooi; J Zollfrank; J Friedrich
Journal:  Biophys J       Date:  1992-12       Impact factor: 4.033

4.  Stark effect experiments in cytochrome c-type proteins: structural hierarchies.

Authors:  M Köhler; J Gafert; J Friedrich; J M Vanderkooi; M Laberge
Journal:  Biophys J       Date:  1996-07       Impact factor: 4.033

5.  Energy selection is not correlated in the Qx and Qy bands of a Mg-porphyrin embedded in a protein.

Authors:  A Suisalu; K Mauring; J Kikas; L Herenyi; J Fidy
Journal:  Biophys J       Date:  2001-01       Impact factor: 4.033

6.  Energy landscape of the tautomer states of mesoporphyrin embedded in horseradish peroxidase.

Authors:  L Herenyi; J Fidy; J Gafert; J Friedrich
Journal:  Biophys J       Date:  1995-08       Impact factor: 4.033

7.  Electron paramagnetic resonance of the excited triplet state of metal-free and metal-substituted cytochrome c.

Authors:  P J Angiolillo; J M Vanderkooi
Journal:  Biophys J       Date:  1995-06       Impact factor: 4.033

8.  Spectral hole burning study of protoporphyrin IX substituted myoglobin.

Authors:  J Zollfrank; J Friedrich; F Parak
Journal:  Biophys J       Date:  1992-03       Impact factor: 4.033

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.