Literature DB >> 11336632

Engineering of a glycosidase Family 7 cellobiohydrolase to more alkaline pH optimum: the pH behaviour of Trichoderma reesei Cel7A and its E223S/ A224H/L225V/T226A/D262G mutant.

D Becker1, C Braet, H Brumer , M Claeyssens, C Divne, B R Fagerström, M Harris, T A Jones, G J Kleywegt, A Koivula, S Mahdi, K Piens, M L Sinnott, J Ståhlberg, T T Teeri, M Underwood, G Wohlfahrt.   

Abstract

The crystal structures of Family 7 glycohydrolases suggest that a histidine residue near the acid/base catalyst could account for the higher pH optimum of the Humicola insolens endoglucanase Cel7B, than the corresponding Trichoderma reesei enzymes. Modelling studies indicated that introduction of histidine at the homologous position in T. reesei Cel7A (Ala(224)) required additional changes to accommodate the bulkier histidine side chain. X-ray crystallography of the catalytic domain of the E223S/A224H/L225V/T226A/D262G mutant reveals that major differences from the wild-type are confined to the mutations themselves. The introduced histidine residue is in plane with its counterpart in H. insolens Cel7B, but is 1.0 A (=0.1 nm) closer to the acid/base Glu(217) residue, with a 3.1 A contact between N(epsilon2) and O(epsilon1). The pH variation of k(cat)/K(m) for 3,4-dinitrophenyl lactoside hydrolysis was accurately bell-shaped for both wild-type and mutant, with pK(1) shifting from 2.22+/-0.03 in the wild-type to 3.19+/-0.03 in the mutant, and pK(2) shifting from 5.99+/-0.02 to 6.78+/-0.02. With this poor substrate, the ionizations probably represent those of the free enzyme. The relative k(cat) for 2-chloro-4-nitrophenyl lactoside showed similar behaviour. The shift in the mutant pH optimum was associated with lower k(cat)/K(m) values for both lactosides and cellobiosides, and a marginally lower stability. However, k(cat) values for cellobiosides are higher for the mutant. This we attribute to reduced non-productive binding in the +1 and +2 subsites; inhibition by cellobiose is certainly relieved in the mutant. The weaker binding of cellobiose is due to the loss of two water-mediated hydrogen bonds.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11336632      PMCID: PMC1221808          DOI: 10.1042/0264-6021:3560019

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  29 in total

1.  Arazoformyl dipeptide substrates for thermolysin. Confirmation of a reverse protonation catalytic mechanism.

Authors:  W L Mock; D J Stanford
Journal:  Biochemistry       Date:  1996-06-11       Impact factor: 3.162

2.  Updating the sequence-based classification of glycosyl hydrolases.

Authors:  B Henrissat; A Bairoch
Journal:  Biochem J       Date:  1996-06-01       Impact factor: 3.857

Review 3.  Checking your imagination: applications of the free R value.

Authors:  G J Kleywegt; A T Brünger
Journal:  Structure       Date:  1996-08-15       Impact factor: 5.006

4.  Improved production of Trichoderma harzianum endochitinase by expression in Trichoderma reesei.

Authors:  E Margolles-Clark; C K Hayes; G E Harman; M Penttilä
Journal:  Appl Environ Microbiol       Date:  1996-06       Impact factor: 4.792

5.  The adsorption of a bacterial cellulase and its two isolated domains to crystalline cellulose.

Authors:  N R Gilkes; E Jervis; B Henrissat; B Tekant; R C Miller; R A Warren; D G Kilburn
Journal:  J Biol Chem       Date:  1992-04-05       Impact factor: 5.157

6.  Fungal cellulase systems. Comparison of the specificities of the cellobiohydrolases isolated from Penicillium pinophilum and Trichoderma reesei.

Authors:  M Claeyssens; H Van Tilbeurgh; P Tomme; T M Wood; S I McRae
Journal:  Biochem J       Date:  1989-08-01       Impact factor: 3.857

7.  The three-dimensional crystal structure of the catalytic core of cellobiohydrolase I from Trichoderma reesei.

Authors:  C Divne; J Ståhlberg; T Reinikainen; L Ruohonen; G Pettersson; J K Knowles; T T Teeri; T A Jones
Journal:  Science       Date:  1994-07-22       Impact factor: 47.728

8.  Transformation of Trichoderma reesei based on hygromycin B resistance using homologous expression signals.

Authors:  R L Mach; M Schindler; C P Kubicek
Journal:  Curr Genet       Date:  1994-06       Impact factor: 3.886

9.  Identification of two functionally different classes of exocellulases.

Authors:  B K Barr; Y L Hsieh; B Ganem; D B Wilson
Journal:  Biochemistry       Date:  1996-01-16       Impact factor: 3.162

10.  Progress-curve analysis shows that glucose inhibits the cellotriose hydrolysis catalysed by cellobiohydrolase II from Trichoderma reesei.

Authors:  A Teleman; A Koivula; T Reinikainen; A Valkeajärvi; T T Teeri; T Drakenberg; O Teleman
Journal:  Eur J Biochem       Date:  1995-07-01
View more
  8 in total

1.  Computational investigation of the pH dependence of loop flexibility and catalytic function in glycoside hydrolases.

Authors:  Lintao Bu; Michael F Crowley; Michael E Himmel; Gregg T Beckham
Journal:  J Biol Chem       Date:  2013-03-15       Impact factor: 5.157

2.  Small angle neutron scattering reveals pH-dependent conformational changes in Trichoderma reesei cellobiohydrolase I: implications for enzymatic activity.

Authors:  Sai Venkatesh Pingali; Hugh M O'Neill; Joseph McGaughey; Volker S Urban; Caroline S Rempe; Loukas Petridis; Jeremy C Smith; Barbara R Evans; William T Heller
Journal:  J Biol Chem       Date:  2011-07-22       Impact factor: 5.157

3.  Enhancement of catalytic activity and alkaline stability of cellobiohydrolase by structure-based protein engineering.

Authors:  Kanoknart Prabmark; Katewadee Boonyapakron; Benjarat Bunterngsook; Nattapol Arunrattanamook; Tanaporn Uengwetwanit; Penchit Chitnumsub; Verawat Champreda
Journal:  3 Biotech       Date:  2022-09-09       Impact factor: 2.893

4.  Processive action of cellobiohydrolase Cel7A from Trichoderma reesei is revealed as 'burst' kinetics on fluorescent polymeric model substrates.

Authors:  Kalle Kipper; Priit Väljamäe; Gunnar Johansson
Journal:  Biochem J       Date:  2005-01-15       Impact factor: 3.857

5.  Dissecting and reconstructing synergism: in situ visualization of cooperativity among cellulases.

Authors:  Thomas Ganner; Patricia Bubner; Manuel Eibinger; Claudia Mayrhofer; Harald Plank; Bernd Nidetzky
Journal:  J Biol Chem       Date:  2012-11-01       Impact factor: 5.157

6.  Expression, crystal structure and cellulase activity of the thermostable cellobiohydrolase Cel7A from the fungus Humicola grisea var. thermoidea.

Authors:  Majid Haddad Momeni; Frits Goedegebuur; Henrik Hansson; Saeid Karkehabadi; Glareh Askarieh; Colin Mitchinson; Edmundo A Larenas; Jerry Ståhlberg; Mats Sandgren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2014-08-29

7.  Alleviating product inhibition in cellulase enzyme Cel7A.

Authors:  Meera E Atreya; Kathryn L Strobel; Douglas S Clark
Journal:  Biotechnol Bioeng       Date:  2015-09-10       Impact factor: 4.530

Review 8.  Industrial Use of Cell Wall Degrading Enzymes: The Fine Line Between Production Strategy and Economic Feasibility.

Authors:  Moira Giovannoni; Giovanna Gramegna; Manuel Benedetti; Benedetta Mattei
Journal:  Front Bioeng Biotechnol       Date:  2020-04-29
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.