Literature DB >> 1531222

Identification of sbcD mutations as cosuppressors of recBC that allow propagation of DNA palindromes in Escherichia coli K-12.

F P Gibson1, D R Leach, R G Lloyd.   

Abstract

The function of an open reading frame (orf-45) located upstream of the sbcC gene of Escherichia coli was investigated. Mutations that inactivate sbcC improve the ability to propagate lambda red gam phage that carry a palindromic sequence in their DNA. They also act with sbcB mutations as cosuppressors of the defects in recombination, DNA repair, and cell viability associated with recBC mutations. A 1,282-bp cassette encoding resistance to kanamycin was used to disrupt orf-45. The mutation, which has a polar effect on the expression of sbcC, allowed stable propagation of palindromic lambda phage even when the sbcC gene product was provided in trans. Additional nonpolar mutations in orf-45 were isolated on the basis of their ability to improve the growth of recBC sbcB strains. These mutations also confer resistance to mitomycin C, allow efficient recombination in Hfr crosses, and facilitate stable propagation of palindromic phage. It is concluded that the products of orf-45 and sbcC are functionally related. The orf-45 gene is therefore renamed sbcD.

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Year:  1992        PMID: 1531222      PMCID: PMC206415          DOI: 10.1128/jb.174.4.1222-1228.1992

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  23 in total

1.  Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid.

Authors:  A C Chang; S N Cohen
Journal:  J Bacteriol       Date:  1978-06       Impact factor: 3.490

2.  Genetic analysis of the recG locus of Escherichia coli K-12 and of its role in recombination and DNA repair.

Authors:  R G Lloyd; C Buckman
Journal:  J Bacteriol       Date:  1991-02       Impact factor: 3.490

3.  Use of sodium trichloroacetate and mung bean nuclease to increase sensitivity and precision during transcript mapping.

Authors:  M G Murray
Journal:  Anal Biochem       Date:  1986-10       Impact factor: 3.365

4.  Molecular organization of sbcC, a gene that affects genetic recombination and the viability of DNA palindromes in Escherichia coli K-12.

Authors:  I S Naom; S J Morton; D R Leach; R G Lloyd
Journal:  Nucleic Acids Res       Date:  1989-10-25       Impact factor: 16.971

5.  Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction.

Authors:  P Chomczynski; N Sacchi
Journal:  Anal Biochem       Date:  1987-04       Impact factor: 3.365

6.  Simple method for identification of plasmid-coded proteins.

Authors:  A Sancar; A M Hack; W D Rupp
Journal:  J Bacteriol       Date:  1979-01       Impact factor: 3.490

7.  The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.

Authors:  J Vieira; J Messing
Journal:  Gene       Date:  1982-10       Impact factor: 3.688

8.  Recombinant plasmids with genes for the biosynthesis of alkaline phosphatase of Escherichia coli.

Authors:  W Boidol; M Simonis; M Töpert; G Siewert
Journal:  Mol Gen Genet       Date:  1982

9.  Viability of lambda phages carrying a perfect palindrome in the absence of recombination nucleases.

Authors:  D R Leach; F W Stahl
Journal:  Nature       Date:  1983 Sep 29-Oct 5       Impact factor: 49.962

10.  Specific-purpose plasmid cloning vectors. I. Low copy number, temperature-sensitive, mobilization-defective pSC101-derived containment vectors.

Authors:  T Hashimoto-Gotoh; F C Franklin; A Nordheim; K N Timmis
Journal:  Gene       Date:  1981-12       Impact factor: 3.688

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  38 in total

1.  Palindromes as substrates for multiple pathways of recombination in Escherichia coli.

Authors:  G A Cromie; C B Millar; K H Schmidt; D R Leach
Journal:  Genetics       Date:  2000-02       Impact factor: 4.562

2.  Evidence for two mechanisms of palindrome-stimulated deletion in Escherichia coli: single-strand annealing and replication slipped mispairing.

Authors:  M Bzymek; S T Lovett
Journal:  Genetics       Date:  2001-06       Impact factor: 4.562

3.  RecFOR function is required for DNA repair and recombination in a RecA loading-deficient recB mutant of Escherichia coli.

Authors:  Ivana Ivancić-Baće; Petra Peharec; Suncana Moslavac; Nikolina Skrobot; Erika Salaj-Smic; Krunoslav Brcić-Kostić
Journal:  Genetics       Date:  2003-02       Impact factor: 4.562

4.  Mre11 and Rad50 from Pyrococcus furiosus: cloning and biochemical characterization reveal an evolutionarily conserved multiprotein machine.

Authors:  K P Hopfner; A Karcher; D Shin; C Fairley; J A Tainer; J P Carney
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

5.  The RuvABC resolvase is indispensable for recombinational repair in sbcB15 mutants of Escherichia coli.

Authors:  Davor Zahradka; Ksenija Zahradka; Mirjana Petranović; Damir Dermić; Krunoslav Brcić-Kostić
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

6.  Sae2 is an endonuclease that processes hairpin DNA cooperatively with the Mre11/Rad50/Xrs2 complex.

Authors:  Bettina M Lengsfeld; Alison J Rattray; Venugopal Bhaskara; Rodolfo Ghirlando; Tanya T Paull
Journal:  Mol Cell       Date:  2007-11-30       Impact factor: 17.970

7.  Effects of single-strand DNases ExoI, RecJ, ExoVII, and SbcCD on homologous recombination of recBCD+ strains of Escherichia coli and roles of SbcB15 and XonA2 ExoI mutant enzymes.

Authors:  Brigitte Thoms; Inka Borchers; Wilfried Wackernagel
Journal:  J Bacteriol       Date:  2007-10-26       Impact factor: 3.490

Review 8.  RecBCD enzyme and the repair of double-stranded DNA breaks.

Authors:  Mark S Dillingham; Stephen C Kowalczykowski
Journal:  Microbiol Mol Biol Rev       Date:  2008-12       Impact factor: 11.056

9.  Roles of ExoI and SbcCD nucleases in "reckless" DNA degradation in recA mutants of Escherichia coli.

Authors:  Ksenija Zahradka; Maja Buljubasić; Mirjana Petranović; Davor Zahradka
Journal:  J Bacteriol       Date:  2008-12-12       Impact factor: 3.490

10.  The SbcCD nuclease of Escherichia coli is a structural maintenance of chromosomes (SMC) family protein that cleaves hairpin DNA.

Authors:  J C Connelly; L A Kirkham; D R Leach
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-07       Impact factor: 11.205

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