Literature DB >> 19074388

Roles of ExoI and SbcCD nucleases in "reckless" DNA degradation in recA mutants of Escherichia coli.

Ksenija Zahradka1, Maja Buljubasić, Mirjana Petranović, Davor Zahradka.   

Abstract

Exponentially growing recA mutant cells of Escherichia coli display pronounced DNA degradation that starts at the sites of DNA damage and depends on RecBCD nuclease (ExoV) activity. As a consequence of this "reckless" DNA degradation, populations of recA mutants contain a large proportion of anucleate cells. We have found that both DNA degradation and anucleate-cell production are efficiently suppressed by mutations in the xonA (sbcB) and sbcD genes. The suppressive effects of these mutations were observed in normally grown, as well as in UV-irradiated, recA cells. The products of the xonA and sbcD genes are known to code for the ExoI and SbcCD nucleases, respectively. Since both xonA and sbcD mutations are required for strong suppression of DNA degradation while individual mutations have only a weak suppressive effect, we infer that ExoI and SbcCD play partially redundant roles in regulating DNA degradation in recA cells. We suggest that their roles might be in processing (blunting) DNA ends, thereby producing suitable substrates for RecBCD binding.

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Year:  2008        PMID: 19074388      PMCID: PMC2648197          DOI: 10.1128/JB.01877-07

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  48 in total

1.  RecA protein of Escherichia coli and chromosome partitioning.

Authors:  J W Zyskind; A L Svitil; W B Stine; M C Biery; D W Smith
Journal:  Mol Microbiol       Date:  1992-09       Impact factor: 3.501

2.  Chi sequence protects against RecBCD degradation of DNA in vivo.

Authors:  P Dabert; S D Ehrlich; A Gruss
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-15       Impact factor: 11.205

3.  Identification of sbcD mutations as cosuppressors of recBC that allow propagation of DNA palindromes in Escherichia coli K-12.

Authors:  F P Gibson; D R Leach; R G Lloyd
Journal:  J Bacteriol       Date:  1992-02       Impact factor: 3.490

4.  Chromosome partitioning in Escherichia coli: novel mutants producing anucleate cells.

Authors:  S Hiraga; H Niki; T Ogura; C Ichinose; H Mori; B Ezaki; A Jaffé
Journal:  J Bacteriol       Date:  1989-03       Impact factor: 3.490

Review 5.  rec genes and homologous recombination proteins in Escherichia coli.

Authors:  A J Clark
Journal:  Biochimie       Date:  1991-04       Impact factor: 4.079

6.  Physical and biochemical characterization of cloned sbcB and xonA mutations from Escherichia coli K-12.

Authors:  G J Phillips; D C Prasher; S R Kushner
Journal:  J Bacteriol       Date:  1988-05       Impact factor: 3.490

7.  The recombination hotspot chi is a regulatory sequence that acts by attenuating the nuclease activity of the E. coli RecBCD enzyme.

Authors:  D A Dixon; S C Kowalczykowski
Journal:  Cell       Date:  1993-04-09       Impact factor: 41.582

8.  Degradation of individual chromosomes in recA mutants of Escherichia coli.

Authors:  K Skarstad; E Boye
Journal:  J Bacteriol       Date:  1993-09       Impact factor: 3.490

9.  Toporegulation of bacterial division according to the nucleoid occlusion model.

Authors:  C L Woldringh; E Mulder; P G Huls; N Vischer
Journal:  Res Microbiol       Date:  1991 Feb-Apr       Impact factor: 3.992

10.  Chi sites in combination with RecA protein increase the survival of linear DNA in Escherichia coli by inactivating exoV activity of RecBCD nuclease.

Authors:  A Kuzminov; E Schabtach; F W Stahl
Journal:  EMBO J       Date:  1994-06-15       Impact factor: 11.598

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  15 in total

1.  RecG protein and single-strand DNA exonucleases avoid cell lethality associated with PriA helicase activity in Escherichia coli.

Authors:  Christian J Rudolph; Akeel A Mahdi; Amy L Upton; Robert G Lloyd
Journal:  Genetics       Date:  2010-07-20       Impact factor: 4.562

2.  Characterization of cell death in Escherichia coli mediated by XseA, a large subunit of exonuclease VII.

Authors:  Hyeim Jung; Junwei Liang; Yuna Jung; Dongbin Lim
Journal:  J Microbiol       Date:  2015-12-02       Impact factor: 3.422

Review 3.  RecBCD is required to complete chromosomal replication: Implications for double-strand break frequencies and repair mechanisms.

Authors:  Justin Courcelle; Brian M Wendel; Dena D Livingstone; Charmain T Courcelle
Journal:  DNA Repair (Amst)       Date:  2015-05-02

4.  The Mre11:Rad50 structure shows an ATP-dependent molecular clamp in DNA double-strand break repair.

Authors:  Katja Lammens; Derk J Bemeleit; Carolin Möckel; Emanuel Clausing; Alexandra Schele; Sophia Hartung; Christian B Schiller; Maria Lucas; Christof Angermüller; Johannes Söding; Katja Strässer; Karl-Peter Hopfner
Journal:  Cell       Date:  2011-04-01       Impact factor: 41.582

5.  Sources of thymidine and analogs fueling futile damage-repair cycles and ss-gap accumulation during thymine starvation in Escherichia coli.

Authors:  T V Pritha Rao; Andrei Kuzminov
Journal:  DNA Repair (Amst)       Date:  2019-01-16

6.  The DNA Exonucleases of Escherichia coli.

Authors:  Susan T Lovett
Journal:  EcoSal Plus       Date:  2011-12

7.  ATP driven structural changes of the bacterial Mre11:Rad50 catalytic head complex.

Authors:  Carolin Möckel; Katja Lammens; Alexandra Schele; Karl-Peter Hopfner
Journal:  Nucleic Acids Res       Date:  2011-09-21       Impact factor: 16.971

8.  Dissecting the RecA-(In)dependent Response to Mitomycin C in Mycobacterium tuberculosis Using Transcriptional Profiling and Proteomics Analyses.

Authors:  Anna Brzostek; Przemysław Płociński; Alina Minias; Aneta Ciszewska; Filip Gąsior; Jakub Pawełczyk; Bożena Dziadek; Marcin Słomka; Jarosław Dziadek
Journal:  Cells       Date:  2021-05-11       Impact factor: 6.600

9.  Competitive advantage of oxygen-tolerant bioanodes of Geobacter sulfurreducens in bioelectrochemical systems.

Authors:  Allison M Speers; Gemma Reguera
Journal:  Biofilm       Date:  2021-06-14

10.  Structural insights into DNA repair by RNase T--an exonuclease processing 3' end of structured DNA in repair pathways.

Authors:  Yu-Yuan Hsiao; Woei-Horng Fang; Chia-Chia Lee; Yi-Ping Chen; Hanna S Yuan
Journal:  PLoS Biol       Date:  2014-03-04       Impact factor: 8.029

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