Literature DB >> 15297511

Use of 16S rRNA gene sequencing for rapid confirmatory identification of Brucella isolates.

Jay E Gee1, Barun K De, Paul N Levett, Anne M Whitney, Ryan T Novak, Tanja Popovic.   

Abstract

Members of the genus Brucella are categorized as biothreat agents and pose a hazard for both humans and animals. Current identification methods rely on biochemical tests that may require up to 7 days for results. We sequenced the 16S rRNA genes of 65 Brucella strains along with 17 related strains likely to present a differential diagnostic challenge. All Brucella 16S rRNA gene sequences were determined to be identical and were clearly different from the 17 related strains, suggesting that 16S rRNA gene sequencing is a reliable tool for rapid genus-level identification of Brucella spp. and their differentiation from closely related organisms.

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Year:  2004        PMID: 15297511      PMCID: PMC497563          DOI: 10.1128/JCM.42.8.3649-3654.2004

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  40 in total

Review 1.  A review of molecular recognition technologies for detection of biological threat agents.

Authors:  S S Iqbal; M W Mayo; J G Bruno; B V Bronk; C A Batt; J P Chambers
Journal:  Biosens Bioelectron       Date:  2000       Impact factor: 10.618

2.  An IS711 element downstream of the bp26 gene is a specific marker of Brucella spp. isolated from marine mammals.

Authors:  A Cloeckaert; M Grayon; O Grepinet
Journal:  Clin Diagn Lab Immunol       Date:  2000-09

Review 3.  Bacterial pathogens as biological weapons and agents of bioterrorism.

Authors:  Ronald A Greenfield; Douglas A Drevets; Linda J Machado; Gene W Voskuhl; Paul Cornea; Michael S Bronze
Journal:  Am J Med Sci       Date:  2002-06       Impact factor: 2.378

4.  The genome sequence of the facultative intracellular pathogen Brucella melitensis.

Authors:  Vito G DelVecchio; Vinayak Kapatral; Rajendra J Redkar; Guy Patra; Cesar Mujer; Tamara Los; Natalia Ivanova; Iain Anderson; Anamitra Bhattacharyya; Athanasios Lykidis; Gary Reznik; Lynn Jablonski; Niels Larsen; Mark D'Souza; Axel Bernal; Mikhail Mazur; Eugene Goltsman; Eugene Selkov; Philip H Elzer; Sue Hagius; David O'Callaghan; Jean-Jacques Letesson; Robert Haselkorn; Nikos Kyrpides; Ross Overbeek
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-26       Impact factor: 11.205

5.  Specificity of a polymerase chain reaction assay of a target sequence on the 31-kilodalton Brucella antigen DNA used to diagnose human brucellosis.

Authors:  M C Casañas; M I Queipo-Ortuño; A Rodriguez-Torres; A Orduña; J D Colmenero; P Morata
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2001-02       Impact factor: 3.267

6.  Characterization of the three ribosomal RNA operons rrnA, rrnB, and rrnC, from Brucella melitensis.

Authors:  B J Bricker
Journal:  Gene       Date:  2000-09-05       Impact factor: 3.688

7.  Public health assessment of potential biological terrorism agents.

Authors:  Lisa D Rotz; Ali S Khan; Scott R Lillibridge; Stephen M Ostroff; James M Hughes
Journal:  Emerg Infect Dis       Date:  2002-02       Impact factor: 6.883

8.  The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts.

Authors:  Ian T Paulsen; Rekha Seshadri; Karen E Nelson; Jonathan A Eisen; John F Heidelberg; Timothy D Read; Robert J Dodson; Lowell Umayam; Lauren M Brinkac; Maureen J Beanan; Sean C Daugherty; Robert T Deboy; A Scott Durkin; James F Kolonay; Ramana Madupu; William C Nelson; Bola Ayodeji; Margaret Kraul; Jyoti Shetty; Joel Malek; Susan E Van Aken; Steven Riedmuller; Herve Tettelin; Steven R Gill; Owen White; Steven L Salzberg; David L Hoover; Luther E Lindler; Shirley M Halling; Stephen M Boyle; Claire M Fraser
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-23       Impact factor: 11.205

9.  Time-space clustering of human brucellosis, California, 1973-1992.

Authors:  Geoffrey T Fosgate; Tim E Carpenter; Bruno B Chomel; James T Case; Emilio E DeBess; Kevin F Reilly
Journal:  Emerg Infect Dis       Date:  2002-07       Impact factor: 6.883

10.  Sequencing of 16S rRNA gene: a rapid tool for identification of Bacillus anthracis.

Authors:  Claudio T Sacchi; Anne M Whitney; Leonard W Mayer; Roger Morey; Arnold Steigerwalt; Arijana Boras; Robin S Weyant; Tanja Popovic
Journal:  Emerg Infect Dis       Date:  2002-10       Impact factor: 6.883

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  38 in total

1.  Identification and characterization of variable-number tandem-repeat markers for typing of Brucella spp.

Authors:  Adrian M Whatmore; Stephen J Shankster; Lorraine L Perrett; Terry J Murphy; Simon D Brew; Rachel E Thirlwall; Sally J Cutler; Alastair P MacMillan
Journal:  J Clin Microbiol       Date:  2006-06       Impact factor: 5.948

2.  Real-time PCR assays of single-nucleotide polymorphisms defining the major Brucella clades.

Authors:  Jeffrey T Foster; Richard T Okinaka; Rita Svensson; Kathryn Shaw; Barun K De; Richard A Robison; William S Probert; Leo J Kenefic; William D Brown; Paul Keim
Journal:  J Clin Microbiol       Date:  2007-11-21       Impact factor: 5.948

3.  Novel Brucella strain (BO1) associated with a prosthetic breast implant infection.

Authors:  Barun K De; Larry Stauffer; Mark S Koylass; Susan E Sharp; Jay E Gee; Leta O Helsel; Arnold G Steigerwalt; Robert Vega; Thomas A Clark; Maryam I Daneshvar; Patricia P Wilkins; Adrian M Whatmore
Journal:  J Clin Microbiol       Date:  2007-10-31       Impact factor: 5.948

4.  Rapid identification and discrimination of Brucella isolates by use of real-time PCR and high-resolution melt analysis.

Authors:  Jonas M Winchell; Bernard J Wolff; Rebekah Tiller; Michael D Bowen; Alex R Hoffmaster
Journal:  J Clin Microbiol       Date:  2010-01-06       Impact factor: 5.948

5.  Emergence of a clonal lineage of Brucella abortus biovar 3 in clinical cases in Spain.

Authors:  Sylvia Valdezate; Ana Navarro; Virginia Rubio; Bruno Garin-Bastuji; David Albert; Purificación Hernandez; Pilar M Alonso; Juan A Saéz-Nieto
Journal:  J Clin Microbiol       Date:  2009-06-24       Impact factor: 5.948

6.  Mistaken identity of Brucella infection.

Authors:  Jing Yang; Xiao-qing Ren; Mei-ling Chu; Dong-ya Meng; Wen-cheng Xue
Journal:  J Clin Microbiol       Date:  2013-02-27       Impact factor: 5.948

7.  Intraspecies biodiversity of the genetically homologous species Brucella microti.

Authors:  Sascha Al Dahouk; Erwin Hofer; Herbert Tomaso; Gilles Vergnaud; Philippe Le Flèche; Axel Cloeckaert; Mark S Koylass; Adrian M Whatmore; Karsten Nöckler; Holger C Scholz
Journal:  Appl Environ Microbiol       Date:  2011-12-30       Impact factor: 4.792

8.  Growth kinetics and toxicity of Enterobacter cloacae grown on linear alkylbenzene sulfonate as sole carbon source.

Authors:  Khaled M Khleifat; Khaled A Tarawneh; Mohammad Ali Wedyan; Amjad A Al-Tarawneh; Khalid Al Sharafa
Journal:  Curr Microbiol       Date:  2008-07-29       Impact factor: 2.188

9.  A sporadic outbreak of human brucellosis in Korea.

Authors:  Mi-Yeoun Park; Chang-Seop Lee; Young-Sil Choi; Seoung-Ju Park; Joo-Sun Lee; Heung-Bum Lee
Journal:  J Korean Med Sci       Date:  2005-12       Impact factor: 2.153

10.  Identification of an unusual Brucella strain (BO2) from a lung biopsy in a 52 year-old patient with chronic destructive pneumonia.

Authors:  Rebekah V Tiller; Jay E Gee; David R Lonsway; Sonali Gribble; Scott C Bell; Amy V Jennison; John Bates; Chris Coulter; Alex R Hoffmaster; Barun K De
Journal:  BMC Microbiol       Date:  2010-01-27       Impact factor: 3.605

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