Literature DB >> 20053863

Rapid identification and discrimination of Brucella isolates by use of real-time PCR and high-resolution melt analysis.

Jonas M Winchell1, Bernard J Wolff, Rebekah Tiller, Michael D Bowen, Alex R Hoffmaster.   

Abstract

Definitive identification of Brucella species remains a challenge due to the high degree of genetic homology shared within the genus. We report the development of a molecular technique which utilizes real-time PCR followed by high-resolution melt (HRM) curve analysis to reliably type members of this genus. Using a panel of seven primer sets, we tested 153 Brucella spp. isolates with >99% accuracy compared to traditional techniques. This assay provides a useful diagnostic tool that can rapidly type Brucella isolates and has the potential to detect novel species. This approach may also prove helpful for clinical, epidemiological and veterinary investigations.

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Year:  2010        PMID: 20053863      PMCID: PMC2832424          DOI: 10.1128/JCM.02021-09

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  18 in total

1.  Use of 16S rRNA gene sequencing for rapid confirmatory identification of Brucella isolates.

Authors:  Jay E Gee; Barun K De; Paul N Levett; Anne M Whitney; Ryan T Novak; Tanja Popovic
Journal:  J Clin Microbiol       Date:  2004-08       Impact factor: 5.948

Review 2.  Brucellosis--new aspects of an old disease.

Authors:  S J Cutler; A M Whatmore; N J Commander
Journal:  J Appl Microbiol       Date:  2005       Impact factor: 3.772

Review 3.  Brucellosis.

Authors:  Georgios Pappas; Nikolaos Akritidis; Mile Bosilkovski; Epameinondas Tsianos
Journal:  N Engl J Med       Date:  2005-06-02       Impact factor: 91.245

4.  Real-time PCR assays of single-nucleotide polymorphisms defining the major Brucella clades.

Authors:  Jeffrey T Foster; Richard T Okinaka; Rita Svensson; Kathryn Shaw; Barun K De; Richard A Robison; William S Probert; Leo J Kenefic; William D Brown; Paul Keim
Journal:  J Clin Microbiol       Date:  2007-11-21       Impact factor: 5.948

5.  Whole-genome analyses of speciation events in pathogenic Brucellae.

Authors:  Patrick S G Chain; Diego J Comerci; Marcelo E Tolmasky; Frank W Larimer; Stephanie A Malfatti; Lisa M Vergez; Fernan Aguero; Miriam L Land; Rodolfo A Ugalde; Emilio Garcia
Journal:  Infect Immun       Date:  2005-12       Impact factor: 3.441

6.  Multiplex assay based on single-nucleotide polymorphisms for rapid identification of Brucella isolates at the species level.

Authors:  Julie C Scott; Mark S Koylass; Michael R Stubberfield; Adrian M Whatmore
Journal:  Appl Environ Microbiol       Date:  2007-09-21       Impact factor: 4.792

7.  Differentiation of Brucella abortus bv. 1, 2, and 4, Brucella melitensis, Brucella ovis, and Brucella suis bv. 1 by PCR.

Authors:  B J Bricker; S M Halling
Journal:  J Clin Microbiol       Date:  1994-11       Impact factor: 5.948

8.  Brucella ceti sp. nov. and Brucella pinnipedialis sp. nov. for Brucella strains with cetaceans and seals as their preferred hosts.

Authors:  Geoffrey Foster; Bjorn S Osterman; Jacques Godfroid; Isabelle Jacques; Axel Cloeckaert
Journal:  Int J Syst Evol Microbiol       Date:  2007-11       Impact factor: 2.747

9.  Characterisation of the genetic diversity of Brucella by multilocus sequencing.

Authors:  Adrian M Whatmore; Lorraine L Perrett; Alastair P MacMillan
Journal:  BMC Microbiol       Date:  2007-04-20       Impact factor: 3.605

10.  Brucella 'HOOF-Prints': strain typing by multi-locus analysis of variable number tandem repeats (VNTRs).

Authors:  Betsy J Bricker; Darla R Ewalt; Shirley M Halling
Journal:  BMC Microbiol       Date:  2003-07-11       Impact factor: 3.605

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  22 in total

1.  Raman spectroscopy as a potential tool for detection of Brucella spp. in milk.

Authors:  Susann Meisel; Stephan Stöckel; Mandy Elschner; Falk Melzer; Petra Rösch; Jürgen Popp
Journal:  Appl Environ Microbiol       Date:  2012-06-01       Impact factor: 4.792

2.  Nucleotide polymorphism-based single-tube test for robust molecular identification of all currently described Brucella species.

Authors:  Pierre Wattiau; Adrian M Whatmore; Mieke Van Hessche; Jacques Godfroid; David Fretin
Journal:  Appl Environ Microbiol       Date:  2011-07-29       Impact factor: 4.792

3.  Development of a novel real-time PCR assay with high-resolution melt analysis to detect and differentiate OXA-48-Like β-lactamases in carbapenem-resistant Enterobacteriaceae.

Authors:  Peera Hemarajata; Shangxin Yang; Janet A Hindler; Romney M Humphries
Journal:  Antimicrob Agents Chemother       Date:  2015-06-29       Impact factor: 5.191

Review 4.  Current and emerging Legionella diagnostics for laboratory and outbreak investigations.

Authors:  Jeffrey W Mercante; Jonas M Winchell
Journal:  Clin Microbiol Rev       Date:  2015-01       Impact factor: 26.132

Review 5.  Brucellosis in low-income and middle-income countries.

Authors:  Matthew P Rubach; Jo E B Halliday; Sarah Cleaveland; John A Crump
Journal:  Curr Opin Infect Dis       Date:  2013-10       Impact factor: 4.915

6.  Development and assessment of multiplex high resolution melting assay as a tool for rapid single-tube identification of five Brucella species.

Authors:  Krishna K Gopaul; Jessica Sells; Robin Lee; Stephen M Beckstrom-Sternberg; Jeffrey T Foster; Adrian M Whatmore
Journal:  BMC Res Notes       Date:  2014-12-11

7.  Use of a New High Resolution Melting Method for Genotyping Pathogenic Leptospira spp.

Authors:  Florence Naze; Amélie Desvars; Mathieu Picardeau; Pascale Bourhy; Alain Michault
Journal:  PLoS One       Date:  2015-07-08       Impact factor: 3.240

8.  Detection and discrimination of two Brucella species by multiplex real-time PCR and high-resolution melt analysis curve from human blood and comparison of results using RFLP.

Authors:  Vahhab Piranfar; Malike Sharif; Mojtaba Hashemi; Ali Reza Vahdati; Reza Mirnejad
Journal:  Iran J Basic Med Sci       Date:  2015-09       Impact factor: 2.699

Review 9.  Polymerase chain reaction-based assays for the diagnosis of human brucellosis.

Authors:  Ying Wang; Zhanli Wang; Yaxian Zhang; Liyun Bai; Yue Zhao; Chunfang Liu; An Ma; Hui Yu
Journal:  Ann Clin Microbiol Antimicrob       Date:  2014-08-01       Impact factor: 3.944

10.  Differential diagnosis of Brucella abortus by real-time PCR based on a single-nucleotide polymorphisms.

Authors:  Ji-Yeon Kim; Sung-Il Kang; Jin Ju Lee; Kichan Lee; So-Ra Sung; Janchivdorj Erdenebaataar; Batbaatar Vanaabaatar; Suk Chan Jung; Yong Ho Park; Han-Sang Yoo; Moon Her
Journal:  J Vet Med Sci       Date:  2015-12-14       Impact factor: 1.267

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