Literature DB >> 24426162

Cloning and Characterizing the Thermophilic and Detergent Stable Cellulase CelMytB from Saccharophagus sp. Myt-1.

Akihiro Sakatoku1, Daisuke Tanaka1, Hiroyuki Kamachi1, Shogo Nakamura1.   

Abstract

We previously isolated and reported a second species of the Saccharophagus genus, Saccharophagus sp. strain Myt-1. In the present study, a cellulase gene (celMytB) from the genomic DNA of Myt-1 was cloned and characterized. The DNA sequence fragment contained an open reading frame of 1,893 bp that encoded a protein of 631 amino acids with an estimated molecular mass of 66.8 kDa. The deduced protein, CelMytB, had a catalytic domain that contained a conserved signature sequence (VIYEIYNEPL) of glycosyl hydrolase family 5 and a CBM6 cellulose binding module. CelMytB showed optimal activity at 55 °C and pH 6.5, which is similar to the optimal temperature and pH profile of cel5H, an endoglucanase from the closely related S. degradans 2-40. However, the cellulase (degradation of soluble cellulose) and avicelase (degradation of crystalline cellulose) activities of CelMytB were about 3-fold and 100-fold higher, respectively, than the equivalent activities of cel5H. Moreover, CelMytB could degrade xylan. From the zymogram results, we speculated that the catalytic domain of CelMytB had high activity even without the cellulose binding module. The presence of some detergents stimulated the cellulase activity of CelMytB.

Entities:  

Keywords:  Cellulase; Detergent stable; Saccharophagus sp. Myt-1; Thermophilic; Xylanase

Year:  2013        PMID: 24426162      PMCID: PMC3889849          DOI: 10.1007/s12088-013-0421-0

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN: 0046-8991            Impact factor:   2.461


  28 in total

1.  Chemistry: cellulose stacks up.

Authors:  Mike Jarvis
Journal:  Nature       Date:  2003-12-11       Impact factor: 49.962

2.  Kinetic and structural optimization to catalysis at low temperatures in a psychrophilic cellulase from the Antarctic bacterium Pseudoalteromonas haloplanktis.

Authors:  Geneviève Garsoux; Josette Lamotte; Charles Gerday; Georges Feller
Journal:  Biochem J       Date:  2004-12-01       Impact factor: 3.857

3.  Notes on sugar determination.

Authors:  M SMOGYI
Journal:  J Biol Chem       Date:  1952-03       Impact factor: 5.157

4.  Optimal production of a novel endo-acting beta-1,4-xylanase cloned from Saccharophagus degradans 2-40 into Escherichia coli BL21(DE3).

Authors:  Ja Kyong Ko; Min Woo Jung; Kyoung Heon Kim; In-Geol Choi
Journal:  N Biotechnol       Date:  2009-07-29       Impact factor: 5.079

5.  Characterization of a new cold-adapted lipase from Pseudomonas sp. TK-3.

Authors:  Daisuke Tanaka; Satoru Yoneda; Yoko Yamashiro; Akihiro Sakatoku; Takuro Kayashima; Kasumi Yamakawa; Shogo Nakamura
Journal:  Appl Biochem Biotechnol       Date:  2012-06-30       Impact factor: 2.926

6.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

7.  Purification and characterization of carboxymethyl cellulase from Bacillus sp. isolated from a paddy field.

Authors:  Ponnuswamy Vijayaraghavan; S G Prakash Vincent
Journal:  Pol J Microbiol       Date:  2012

8.  Study and design of stability in GH5 cellulases.

Authors:  Somayesadat Badieyan; David R Bevan; Chenming Zhang
Journal:  Biotechnol Bioeng       Date:  2011-08-18       Impact factor: 4.530

9.  Identification and analysis of polyserine linker domains in prokaryotic proteins with emphasis on the marine bacterium Microbulbifer degradans.

Authors:  Michael B Howard; Nathan A Ekborg; Larry E Taylor; Steven W Hutcheson; Ronald M Weiner
Journal:  Protein Sci       Date:  2004-04-09       Impact factor: 6.725

10.  Processive endoglucanases mediate degradation of cellulose by Saccharophagus degradans.

Authors:  Brian J Watson; Haitao Zhang; Atkinson G Longmire; Young Hwan Moon; Steven W Hutcheson
Journal:  J Bacteriol       Date:  2009-07-17       Impact factor: 3.490

View more
  1 in total

1.  Inhibition of extracellular proteases improves the production of a xylanase in Parageobacillus thermoglucosidasius.

Authors:  Alexandria T N Holland; Michael J Danson; Albert Bolhuis
Journal:  BMC Biotechnol       Date:  2019-03-20       Impact factor: 2.563

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.