Literature DB >> 15241018

Laying the cytotaxonomic foundations of a new model grass, Brachypodium distachyon (L.) Beauv.

Robert Hasterok1, John Draper, Glyn Jenkins.   

Abstract

Brachypodium distachyon is a ubiquitous, temperate grass species which is being developed and exploited as an alternative model to rice, in order to gain access to important syntenic regions of the genomes of less tractable relatives such as wheat. As part of this initiative, this paper describes for the first time the cytotaxonomy of members of the polyploid series of this species, and challenges the assumption that the series evolved simply by chromosome doubling. In situ hybridization using genomic DNA probes and rDNA markers uncovers a hybrid origin of several of the polyploid ecotypes, and sheds light upon the complex evolution of this species and its close relatives.

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Year:  2004        PMID: 15241018     DOI: 10.1023/B:CHRO.0000034130.35983.99

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  8 in total

1.  Karyotyping of Brassica amphidiploids using 5S and 25S rDNA as chromosome markers.

Authors:  Sylwia Kulak; Robert Hasterok; Jolanta Maluszynska
Journal:  Hereditas       Date:  2002       Impact factor: 3.271

2.  Combinatorial labelling of DNA probes enables multicolour fluorescence in situ hybridisation in plants.

Authors:  Robert Hasterok; Tim Langdon; Steve Taylor; Glyn Jenkins
Journal:  Folia Histochem Cytobiol       Date:  2002       Impact factor: 1.698

3.  Nucleotide sequence of the 5.8S and 25S rRNA genes and of the internal transcribed spacers from Arabidopsis thaliana.

Authors:  I Unfried; P Gruendler
Journal:  Nucleic Acids Res       Date:  1990-07-11       Impact factor: 16.971

4.  A cereal centromeric sequence.

Authors:  L Aragón-Alcaide; T Miller; T Schwarzacher; S Reader; G Moore
Journal:  Chromosoma       Date:  1996-12       Impact factor: 4.316

5.  Phylogeny of Poaceae subfamily Pooideae based on chloroplast ndhF gene sequences.

Authors:  P Catalán; E A Kellogg; R G Olmstead
Journal:  Mol Phylogenet Evol       Date:  1997-10       Impact factor: 4.286

6.  Brachypodium distachyon. A new model system for functional genomics in grasses.

Authors:  J Draper; L A Mur; G Jenkins; G C Ghosh-Biswas; P Bablak; R Hasterok; A P Routledge
Journal:  Plant Physiol       Date:  2001-12       Impact factor: 8.340

7.  Phylogenetic relationships of the monogenomic species of the wheat tribe, Triticeae (Poaceae), inferred from nuclear rDNA (internal transcribed spacer) sequences.

Authors:  C Hsiao; N J Chatterton; K H Asay; K B Jensen
Journal:  Genome       Date:  1995-04       Impact factor: 2.166

8.  Sequence organization of the repeating units in the nucleus of wheat which contain 5S rRNA genes.

Authors:  W L Gerlach; T A Dyer
Journal:  Nucleic Acids Res       Date:  1980-11-11       Impact factor: 16.971

  8 in total
  37 in total

1.  Evolution and taxonomic split of the model grass Brachypodium distachyon.

Authors:  Pilar Catalán; Jochen Müller; Robert Hasterok; Glyn Jenkins; Luis A J Mur; Tim Langdon; Alexander Betekhtin; Dorota Siwinska; Manuel Pimentel; Diana López-Alvarez
Journal:  Ann Bot       Date:  2012-01-01       Impact factor: 4.357

2.  Natural variation, differentiation, and genetic trade-offs of ecophysiological traits in response to water limitation in Brachypodium distachyon and its descendent allotetraploid B. hybridum (Poaceae).

Authors:  Antonio J Manzaneda; Pedro J Rey; Jill T Anderson; Evan Raskin; Christopher Weiss-Lehman; Thomas Mitchell-Olds
Journal:  Evolution       Date:  2015-09-28       Impact factor: 3.694

3.  Compact genomes and complex evolution in the genus Brachypodium.

Authors:  Elzbieta Wolny; Karolina Lesniewska; Robert Hasterok; Tim Langdon
Journal:  Chromosoma       Date:  2010-12-30       Impact factor: 4.316

4.  A rapid and efficient transformation protocol for the grass Brachypodium distachyon.

Authors:  Pernille Christiansen; Claus Henrik Andersen; Thomas Didion; Marianne Folling; Klaus Kristian Nielsen
Journal:  Plant Cell Rep       Date:  2004-10-19       Impact factor: 4.570

5.  The evolutionary history of PDR in Brachypodium distachyon polyploids.

Authors:  Yi Shang; Lulin Ma; Haiyan Wang; Wei Feng; Peidu Chen; Xuying Cao; Dajun Liu; Xiu-E Wang
Journal:  Mol Biol Rep       Date:  2010-09-21       Impact factor: 2.316

6.  Synteny between Brachypodium distachyon and Hordeum vulgare as revealed by FISH.

Authors:  Lu Ma; Giang T H Vu; Veit Schubert; Koichi Watanabe; Nils Stein; Andreas Houben; Ingo Schubert
Journal:  Chromosome Res       Date:  2010-11-23       Impact factor: 5.239

7.  Comparative cytogenetic analysis of the genomes of the model grass Brachypodium distachyon and its close relatives.

Authors:  Elzbieta Wolny; Robert Hasterok
Journal:  Ann Bot       Date:  2009-07-25       Impact factor: 4.357

8.  Globulins are the main seed storage proteins in Brachypodium distachyon.

Authors:  Debbie L Laudencia-Chingcuanco; William H Vensel
Journal:  Theor Appl Genet       Date:  2008-06-05       Impact factor: 5.699

9.  A high-throughput Agrobacterium-mediated transformation system for the grass model species Brachypodium distachyon L.

Authors:  Daniel Ioan Păcurar; Hans Thordal-Christensen; Klaus Kristian Nielsen; Ingo Lenk
Journal:  Transgenic Res       Date:  2007-12-07       Impact factor: 2.788

10.  Brachypodium genomics.

Authors:  Bahar Sogutmaz Ozdemir; Pilar Hernandez; Ertugrul Filiz; Hikmet Budak
Journal:  Int J Plant Genomics       Date:  2008
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