Literature DB >> 15221484

The metalloclusters of carbon monoxide dehydrogenase/acetyl-CoA synthase: a story in pictures.

Catherine L Drennan1, Tzanko I Doukov, Stephen W Ragsdale.   

Abstract

Eight Ni proteins are known and three of these, CO dehydrogenase (CODH), acetyl-CoA synthase (ACS), and hydrogenase, are Ni-Fe-S proteins. In the last three years, the long-awaited structures of CODH and ACS have been solved. The bioinorganic community was shocked, as the structures of the active sites of CODH and ACS, the C- and A-cluster, respectively, which each had been predicted to consist of a [Fe(4)S(4)] cluster bridged to a single Ni, revealed unexpected compositions and arrangements. Crystal structures of ACS revealed major differences in protein conformation and in A-cluster composition; for example, a [Fe(4)S(4)] cluster bridged to a binuclear center in which one of the metal binding sites was occupied by Ni, Cu, or Zn. Recent studies have revealed Ni-Ni to be the active state, unveiled the source of the heterogeneity that had plagued studies of CODH/ACS for decades, and produced a metal-replacement strategy to generate highly active and nearly homogeneous enzyme.

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Year:  2004        PMID: 15221484     DOI: 10.1007/s00775-004-0563-y

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  19 in total

1.  Nickel in subunit beta of the acetyl-CoA decarbonylase/synthase multienzyme complex in methanogens. Catalytic properties and evidence for a binuclear Ni-Ni site.

Authors:  Simonida Gencic; David A Grahame
Journal:  J Biol Chem       Date:  2002-12-02       Impact factor: 5.157

2.  Undetectable intracellular free copper: the requirement of a copper chaperone for superoxide dismutase.

Authors:  T D Rae; P J Schmidt; R A Pufahl; V C Culotta; T V O'Halloran
Journal:  Science       Date:  1999-04-30       Impact factor: 47.728

3.  Rapid kinetic studies of acetyl-CoA synthesis: evidence supporting the catalytic intermediacy of a paramagnetic NiFeC species in the autotrophic Wood-Ljungdahl pathway.

Authors:  Javier Seravalli; Manoj Kumar; Stephen W Ragsdale
Journal:  Biochemistry       Date:  2002-02-12       Impact factor: 3.162

4.  Crystal structure of nitrile hydratase reveals a novel iron centre in a novel fold.

Authors:  W Huang; J Jia; J Cummings; M Nelson; G Schneider; Y Lindqvist
Journal:  Structure       Date:  1997-05-15       Impact factor: 5.006

5.  Catalytic coupling of the active sites in acetyl-CoA synthase, a bifunctional CO-channeling enzyme.

Authors:  E L Maynard; P A Lindahl
Journal:  Biochemistry       Date:  2001-11-06       Impact factor: 3.162

6.  Life on carbon monoxide: X-ray structure of Rhodospirillum rubrum Ni-Fe-S carbon monoxide dehydrogenase.

Authors:  C L Drennan; J Heo; M D Sintchak; E Schreiter; P W Ludden
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-02       Impact factor: 11.205

7.  Two membrane-associated NiFeS-carbon monoxide dehydrogenases from the anaerobic carbon-monoxide-utilizing eubacterium Carboxydothermus hydrogenoformans.

Authors:  V Svetlitchnyi; C Peschel; G Acker; O Meyer
Journal:  J Bacteriol       Date:  2001-09       Impact factor: 3.490

8.  Inactivation of acetyl-CoA synthase/carbon monoxide dehydrogenase by copper.

Authors:  Matthew R Bramlett; Xiangshi Tan; Paul A Lindahl
Journal:  J Am Chem Soc       Date:  2003-08-06       Impact factor: 15.419

9.  Characterization of the CO oxidation/H2 evolution system of Rhodospirillum rubrum. Role of a 22-kDa iron-sulfur protein in mediating electron transfer between carbon monoxide dehydrogenase and hydrogenase.

Authors:  S A Ensign; P W Ludden
Journal:  J Biol Chem       Date:  1991-09-25       Impact factor: 5.157

10.  Computational studies on the A cluster of acetyl-coenzyme A synthase: geometric and electronic properties of the NiFeC species and mechanistic implications.

Authors:  Ralph P Schenker; Thomas C Brunold
Journal:  J Am Chem Soc       Date:  2003-11-19       Impact factor: 15.419

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  24 in total

1.  Kinetics of CO insertion and acetyl group transfer steps, and a model of the acetyl-CoA synthase catalytic mechanism.

Authors:  Xiangshi Tan; Ivan V Surovtsev; Paul A Lindahl
Journal:  J Am Chem Soc       Date:  2006-09-20       Impact factor: 15.419

2.  Nickel-dependent oligomerization of the alpha subunit of acetyl-coenzyme a synthase/carbon monoxide dehydrogenase.

Authors:  Xiangshi Tan; Ioannis Kagiampakis; Ivan V Surovtsev; Borries Demeler; Paul A Lindahl
Journal:  Biochemistry       Date:  2007-09-22       Impact factor: 3.162

Review 3.  Acetogenesis and the Wood-Ljungdahl pathway of CO(2) fixation.

Authors:  Stephen W Ragsdale; Elizabeth Pierce
Journal:  Biochim Biophys Acta       Date:  2008-08-27

Review 4.  Catalysis of methyl group transfers involving tetrahydrofolate and B(12).

Authors:  Stephen W Ragsdale
Journal:  Vitam Horm       Date:  2008       Impact factor: 3.421

5.  X-ray Absorption Spectroscopy Reveals an Organometallic Ni-C Bond in the CO-Treated Form of Acetyl-CoA Synthase.

Authors:  Mehmet Can; Logan J Giles; Stephen W Ragsdale; Ritimukta Sarangi
Journal:  Biochemistry       Date:  2017-02-23       Impact factor: 3.162

6.  Reactions of the terminal Ni(II)-OH group in substitution and electrophilic reactions with carbon dioxide and other substrates: structural definition of binding modes in an intramolecular Ni(II)...Fe(II) bridged site.

Authors:  Deguang Huang; R H Holm
Journal:  J Am Chem Soc       Date:  2010-04-07       Impact factor: 15.419

Review 7.  Metal centers in the anaerobic microbial metabolism of CO and CO2.

Authors:  Güneş Bender; Elizabeth Pierce; Jeffrey A Hill; Joseph E Darty; Stephen W Ragsdale
Journal:  Metallomics       Date:  2011-06-06       Impact factor: 4.526

Review 8.  Nickel and the carbon cycle.

Authors:  Stephen W Ragsdale
Journal:  J Inorg Biochem       Date:  2007-07-21       Impact factor: 4.155

9.  A turn-on fluorescent sensor for detecting nickel in living cells.

Authors:  Sheel C Dodani; Qiwen He; Christopher J Chang
Journal:  J Am Chem Soc       Date:  2009-12-23       Impact factor: 15.419

10.  Xenon in and at the end of the tunnel of bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase.

Authors:  Tzanko I Doukov; Leah C Blasiak; Javier Seravalli; Stephen W Ragsdale; Catherine L Drennan
Journal:  Biochemistry       Date:  2008-02-23       Impact factor: 3.162

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