Literature DB >> 18801467

Acetogenesis and the Wood-Ljungdahl pathway of CO(2) fixation.

Stephen W Ragsdale1, Elizabeth Pierce.   

Abstract

Conceptually, the simplest way to synthesize an organic molecule is to construct it one carbon at a time. The Wood-Ljungdahl pathway of CO(2) fixation involves this type of stepwise process. The biochemical events that underlie the condensation of two one-carbon units to form the two-carbon compound, acetate, have intrigued chemists, biochemists, and microbiologists for many decades. We begin this review with a description of the biology of acetogenesis. Then, we provide a short history of the important discoveries that have led to the identification of the key components and steps of this usual mechanism of CO and CO(2) fixation. In this historical perspective, we have included reflections that hopefully will sketch the landscape of the controversies, hypotheses, and opinions that led to the key experiments and discoveries. We then describe the properties of the genes and enzymes involved in the pathway and conclude with a section describing some major questions that remain unanswered.

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Year:  2008        PMID: 18801467      PMCID: PMC2646786          DOI: 10.1016/j.bbapap.2008.08.012

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  263 in total

1.  CO2 reduction to formate by NADH catalysed by formate dehydrogenase from Pseudomonas oxalaticus.

Authors:  U Ruschig; U Müller; P Willnow; T Höpner
Journal:  Eur J Biochem       Date:  1976-11-15

2.  Site-directed mutagenesis of a potential catalytic and formyl phosphate binding site and substrate inhibition of N10-formyltetrahydrofolate synthetase.

Authors:  Adam B Leaphart; H Trent Spencer; Charles R Lovell
Journal:  Arch Biochem Biophys       Date:  2002-12-01       Impact factor: 4.013

3.  Crystal structure of a methyltetrahydrofolate- and corrinoid-dependent methyltransferase.

Authors:  T Doukov; J Seravalli; J J Stezowski; S W Ragsdale
Journal:  Structure       Date:  2000-08-15       Impact factor: 5.006

4.  Cloning and expression of the gene cluster encoding key proteins involved in acetyl-CoA synthesis in Clostridium thermoaceticum: CO dehydrogenase, the corrinoid/Fe-S protein, and methyltransferase.

Authors:  D L Roberts; J E James-Hagstrom; D K Garvin; C M Gorst; J A Runquist; J R Baur; F C Haase; S W Ragsdale
Journal:  Proc Natl Acad Sci U S A       Date:  1989-01       Impact factor: 11.205

5.  Evidence for autotrophic CO2 fixation via the reductive tricarboxylic acid cycle by members of the epsilon subdivision of proteobacteria.

Authors:  Michael Hügler; Carl O Wirsen; Georg Fuchs; Craig D Taylor; Stefan M Sievert
Journal:  J Bacteriol       Date:  2005-05       Impact factor: 3.490

6.  Spectroscopic studies of the corrinoid/iron-sulfur protein from Moorella thermoacetica.

Authors:  Troy A Stich; Javier Seravalli; Swarnalatha Venkateshrao; Thomas G Spiro; Stephen W Ragsdale; Thomas C Brunold
Journal:  J Am Chem Soc       Date:  2006-04-19       Impact factor: 15.419

7.  New approach to the cultivation of methanogenic bacteria: 2-mercaptoethanesulfonic acid (HS-CoM)-dependent growth of Methanobacterium ruminantium in a pressureized atmosphere.

Authors:  W E Balch; R S Wolfe
Journal:  Appl Environ Microbiol       Date:  1976-12       Impact factor: 4.792

8.  Sequence and expression of the gene encoding the corrinoid/iron-sulfur protein from Clostridium thermoaceticum and reconstitution of the recombinant protein to full activity.

Authors:  W P Lu; I Schiau; J R Cunningham; S W Ragsdale
Journal:  J Biol Chem       Date:  1993-03-15       Impact factor: 5.157

9.  Mössbauer study of CO dehydrogenase from Clostridium thermoaceticum.

Authors:  P A Lindahl; S W Ragsdale; E Münck
Journal:  J Biol Chem       Date:  1990-03-05       Impact factor: 5.157

10.  INCORPORATION OF C14 FROM CARBON DIOXIDE INTO SUGAR PHOSPHATES, CARBOXYLIC ACIDS, AND AMINO ACIDS BY CLOSTRIDIUM THERMOACETICUM.

Authors:  L LJUNGDAHL; H G WOOD
Journal:  J Bacteriol       Date:  1965-04       Impact factor: 3.490

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  266 in total

1.  Reaction of the molybdenum- and copper-containing carbon monoxide dehydrogenase from Oligotropha carboxydovorans with quinones.

Authors:  Jarett Wilcoxen; Bo Zhang; Russ Hille
Journal:  Biochemistry       Date:  2011-02-16       Impact factor: 3.162

2.  Genome sequence of the solvent-producing bacterium Clostridium carboxidivorans strain P7T.

Authors:  Debarati Paul; Frank W Austin; Tony Arick; Susan M Bridges; Shane C Burgess; Yoginder S Dandass; Mark L Lawrence
Journal:  J Bacteriol       Date:  2010-08-20       Impact factor: 3.490

Review 3.  Biochemistry, evolution and physiological function of the Rnf complex, a novel ion-motive electron transport complex in prokaryotes.

Authors:  Eva Biegel; Silke Schmidt; José M González; Volker Müller
Journal:  Cell Mol Life Sci       Date:  2010-11-12       Impact factor: 9.261

4.  Hydrogen formation and its regulation in Ruminococcus albus: involvement of an electron-bifurcating [FeFe]-hydrogenase, of a non-electron-bifurcating [FeFe]-hydrogenase, and of a putative hydrogen-sensing [FeFe]-hydrogenase.

Authors:  Yanning Zheng; Jörg Kahnt; In Hyuk Kwon; Roderick I Mackie; Rudolf K Thauer
Journal:  J Bacteriol       Date:  2014-08-25       Impact factor: 3.490

5.  Inhibition of urinary stone disease by a multi-species bacterial network ensures healthy oxalate homeostasis.

Authors:  Aaron W Miller; David Choy; Kristina L Penniston; Dirk Lange
Journal:  Kidney Int       Date:  2019-02-28       Impact factor: 10.612

Review 6.  Did Cyclic Metaphosphates Have a Role in the Origin of Life?

Authors:  Thomas Glonek
Journal:  Orig Life Evol Biosph       Date:  2021-03-15       Impact factor: 1.950

7.  Application of metabolic controls for the maximization of lipid production in semicontinuous fermentation.

Authors:  Jingyang Xu; Nian Liu; Kangjian Qiao; Sebastian Vogg; Gregory Stephanopoulos
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-19       Impact factor: 11.205

Review 8.  Carboxylases in natural and synthetic microbial pathways.

Authors:  Tobias J Erb
Journal:  Appl Environ Microbiol       Date:  2011-10-14       Impact factor: 4.792

9.  Microbial manganese(III) reduction fuelled by anaerobic acetate oxidation.

Authors:  Nadia Szeinbaum; Hui Lin; Jay A Brandes; Martial Taillefert; Jennifer B Glass; Thomas J DiChristina
Journal:  Environ Microbiol       Date:  2017-07-17       Impact factor: 5.491

10.  Localizing transcripts to single cells suggests an important role of uncultured deltaproteobacteria in the termite gut hydrogen economy.

Authors:  Adam Z Rosenthal; Xinning Zhang; Kaitlyn S Lucey; Elizabeth A Ottesen; Vikas Trivedi; Harry M T Choi; Niles A Pierce; Jared R Leadbetter
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

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