Literature DB >> 15161973

Heme axial methionine fluxionality in Hydrogenobacter thermophilus cytochrome c552.

Linghao Zhong1, Xin Wen, Terry M Rabinowitz, Brandy S Russell, Elizabeth F Karan, Kara L Bren.   

Abstract

The heme group in paramagnetic (S = 1/2) ferricytochromes c typically displays a markedly asymmetric distribution of unpaired electron spin density among the heme pyrrole beta substituents. This asymmetry is determined by the orientations of the heme axial ligands, histidine and methionine. One exception to this is ferricytochrome c(552) from Hydrogenobacter thermophilus, which has similar amounts of unpaired electron spin density at the beta substituents on all four heme pyrroles. Here, determination of the orientation of the magnetic axes and analysis of NMR line shapes for H. thermophilus ferricytochrome c(552) is performed. These data reveal that the unusual electronic structure for this protein is a result of fluxionality of the heme axial methionine. It is proposed that the ligand undergoes inversion at the pyramidal sulfur, and the rapid interconversion between two diastereomeric forms results in the unusual heme electronic structure. Thus a fluxional process for a metal-bound amino acid side chain has now been identified.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15161973      PMCID: PMC423247          DOI: 10.1073/pnas.0402033101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  Solution structure of reduced horse heart cytochrome c.

Authors:  L Banci; I Bertini; J G Huber; G A Spyroulias; P Turano
Journal:  J Biol Inorg Chem       Date:  1999-02       Impact factor: 3.358

2.  Backbone dynamics and hydrogen exchange of Pseudomonas aeruginosa ferricytochrome c(551).

Authors:  Brandy S Russell; Linghao Zhong; Maria Giulia Bigotti; Francesca Cutruzzolà; Kara L Bren
Journal:  J Biol Inorg Chem       Date:  2002-09-19       Impact factor: 3.358

3.  13C and proton NMR studies of horse cytochrome c. Assignment and temperature dependence of methyl resonances.

Authors:  H Santos; D L Turner
Journal:  FEBS Lett       Date:  1986-01-01       Impact factor: 4.124

Review 4.  Amino acid sequence, haem-iron co-ordination geometry and functional properties of mitochondrial and bacterial c-type cytochromes.

Authors:  H Senn; K Wüthrich
Journal:  Q Rev Biophys       Date:  1985-05       Impact factor: 5.318

5.  Mechanisms of the reactions of cytochrome c. Rate and equilibrium constants for ligand binding to horse heart ferricytochrome c.

Authors:  N Sutin; J K Yandell
Journal:  J Biol Chem       Date:  1972-11-10       Impact factor: 5.157

Review 6.  Enthalpy-entropy compensation phenomena in water solutions of proteins and small molecules: a ubiquitous property of water.

Authors:  R Lumry; S Rajender
Journal:  Biopolymers       Date:  1970       Impact factor: 2.505

7.  Characterization of conformational heterogeneity in the heme pocket of ferricytochrome c using high field proton nuclear magnetic resonance spectroscopy.

Authors:  P D Burns; G N La Mar
Journal:  J Biol Chem       Date:  1981-05-25       Impact factor: 5.157

8.  Structure of cytochrome c551 from Pseudomonas aeruginosa refined at 1.6 A resolution and comparison of the two redox forms.

Authors:  Y Matsuura; T Takano; R E Dickerson
Journal:  J Mol Biol       Date:  1982-04-05       Impact factor: 5.469

9.  Characterization of Hydrogenobacter thermophilus cytochromes c(552 )expressed in the cytoplasm and periplasm of Escherichia coli.

Authors:  Elizabeth F Karan; Brandy S Russell; Kara L Bren
Journal:  J Biol Inorg Chem       Date:  2001-09-08       Impact factor: 3.358

10.  NMR determination of the orientation of the magnetic susceptibility tensor in cyanometmyoglobin: a new probe of steric tilt of bound ligand.

Authors:  S D Emerson; G N La Mar
Journal:  Biochemistry       Date:  1990-02-13       Impact factor: 3.162

View more
  21 in total

1.  Solution conformation of the His-47 to Ala-47 mutant of Pseudomonas stutzeri ZoBell ferrocytochrome c-551.

Authors:  Qiaoli Liang; Gregory T Miller; Chanda A Beeghley; Coyner B Graf; Russell Timkovich
Journal:  Biophys J       Date:  2007-05-11       Impact factor: 4.033

2.  NMR and DFT investigation of heme ruffling: functional implications for cytochrome c.

Authors:  Matthew D Liptak; Xin Wen; Kara L Bren
Journal:  J Am Chem Soc       Date:  2010-07-21       Impact factor: 15.419

3.  Heme-protein vibrational couplings in cytochrome c provide a dynamic link that connects the heme-iron and the protein surface.

Authors:  Mary Grace I Galinato; Jesse G Kleingardner; Sarah E J Bowman; E Ercan Alp; Jiyong Zhao; Kara L Bren; Nicolai Lehnert
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-22       Impact factor: 11.205

4.  Modulation of ligand-field parameters by heme ruffling in cytochromes c revealed by EPR spectroscopy.

Authors:  Mehmet Can; Giorgio Zoppellaro; K Kristoffer Andersson; Kara L Bren
Journal:  Inorg Chem       Date:  2011-11-01       Impact factor: 5.165

Review 5.  The heme environment of mouse neuroglobin: histidine imidazole plane orientations obtained from solution NMR and EPR spectroscopy as compared with X-ray crystallography.

Authors:  F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2006-04-04       Impact factor: 3.358

6.  Heme-coordinating inhibitors of neuronal nitric oxide synthase. Iron-thioether coordination is stabilized by hydrophobic contacts without increased inhibitor potency.

Authors:  Jeffrey D Martell; Huiying Li; Tzanko Doukov; Pavel Martásek; Linda J Roman; Michael Soltis; Thomas L Poulos; Richard B Silverman
Journal:  J Am Chem Soc       Date:  2010-01-20       Impact factor: 15.419

7.  Influence of heme c attachment on heme conformation and potential.

Authors:  Jesse G Kleingardner; Benjamin D Levin; Giorgio Zoppellaro; K Kristoffer Andersson; Sean J Elliott; Kara L Bren
Journal:  J Biol Inorg Chem       Date:  2018-08-24       Impact factor: 3.358

8.  NMR investigations of nitrophorin 2 belt side chain effects on heme orientation and seating of native N-terminus NP2 and NP2(D1A).

Authors:  Robert E Berry; Dhanasekaran Muthu; Tatiana K Shokhireva; Sarah A Garrett; Allena M Goren; Hongjun Zhang; F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2013-11-30       Impact factor: 3.358

Review 9.  Review: studies of ferric heme proteins with highly anisotropic/highly axial low spin (S = 1/2) electron paramagnetic resonance signals with bis-histidine and histidine-methionine axial iron coordination.

Authors:  Giorgio Zoppellaro; Kara L Bren; Amy A Ensign; Espen Harbitz; Ravinder Kaur; Hans-Petter Hersleth; Ulf Ryde; Lars Hederstedt; K Kristoffer Andersson
Journal:  Biopolymers       Date:  2009-12       Impact factor: 2.505

10.  1H and 13C NMR spectroscopic studies of the ferriheme resonances of three low-spin complexes of wild-type nitrophorin 2 and nitrophorin 2(V24E) as a function of pH.

Authors:  Fei Yang; Markus Knipp; Tatiana K Shokhireva; Robert E Berry; Hongjun Zhang; F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2009-06-11       Impact factor: 3.358

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.