Literature DB >> 16586113

The heme environment of mouse neuroglobin: histidine imidazole plane orientations obtained from solution NMR and EPR spectroscopy as compared with X-ray crystallography.

F Ann Walker1.   

Abstract

The 1H NMR chemical shifts of the heme methyl groups of the ferriheme complex of metneuroglobin (Du et al. in J. Am. Chem. Soc. 125:8080-8081, 2003) predict orientations of the axial histidine ligands (Shokhirev and Walker in J. Biol. Inorg. Chem. 3:581-594, 1998) that are not consistent with the X-ray data (Vallone et al. in Proteins Struct. Funct. Bioinf. 56:85-94, 2004), and the EPR spectrum (Vinck et al. in J. Am. Chem. Soc. 126:4516-4517, 2004) is only marginally consistent with these data. The reasons for these inconsistencies appear to be rooted in the high degree of aqueous solution exposure of the heme group and the fact that there are no strong hydrogen-bond acceptors for the histidine imidazole N-H protons provided by the protein. Similar inconsistencies may exist for other water-soluble heme proteins, and 1H NMR spectroscopy provides a simple means to verify whether the solution structure of the heme center is the same as or different from that in the crystalline state.

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Year:  2006        PMID: 16586113     DOI: 10.1007/s00775-006-0095-8

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  101 in total

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Authors:  Mario Rivera; Yuhong Zeng
Journal:  J Inorg Biochem       Date:  2005-01       Impact factor: 4.155

2.  Cytoglobin: a novel globin type ubiquitously expressed in vertebrate tissues.

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3.  Chemical shift-based constraints for solution structure determination of paramagnetic low-spin heme proteins with bis-His and His-CN axial ligands: the cases of oxidized cytochrome b(5) and Met80Ala cyano-cytochrome c.

Authors:  Lucia Banci; Ivano Bertini; Gabriele Cavallaro; Claudio Luchinat
Journal:  J Biol Inorg Chem       Date:  2001-12-21       Impact factor: 3.358

4.  Structural change of the heme pocket due to disulfide bridge formation is significantly larger for neuroglobin than for cytoglobin.

Authors:  Evi Vinck; Sabine Van Doorslaer; Sylvia Dewilde; Luc Moens
Journal:  J Am Chem Soc       Date:  2004-04-14       Impact factor: 15.419

5.  Isolation and characterization of a microperoxidase-8 with a modified histidine axial ligand.

Authors:  Jean-Louis Primus; Sjef Boeren; Michel W F Nielen; Jacques Vervoort; Lucia Banci; Ivonne M C M Rietjens
Journal:  J Biol Inorg Chem       Date:  2002-05-14       Impact factor: 3.358

6.  The heme oxygenase(s)-phytochrome system of Pseudomonas aeruginosa.

Authors:  Rosalina Wegele; Ronja Tasler; Yuhong Zeng; Mario Rivera; Nicole Frankenberg-Dinkel
Journal:  J Biol Chem       Date:  2004-08-15       Impact factor: 5.157

7.  Characterization of the heme-histidine cross-link in cyanobacterial hemoglobins from Synechocystis sp. PCC 6803 and Synechococcus sp. PCC 7002.

Authors:  B Christie Vu; David A Vuletich; Syna A Kuriakose; Christopher J Falzone; Juliette T J Lecomte
Journal:  J Biol Inorg Chem       Date:  2004-01-15       Impact factor: 3.358

8.  Semihemoglobins, high oxygen affinity dimeric forms of human hemoglobin respond efficiently to allosteric effectors without forming tetramers.

Authors:  Antonio Tsuneshige; Kenji Kanaori; Uri Samuni; David Danstker; Joel M Friedman; Saburo Neya; Laura Giangiacomo; Takashi Yonetani
Journal:  J Biol Chem       Date:  2004-09-10       Impact factor: 5.157

9.  The redox state of the cell regulates the ligand binding affinity of human neuroglobin and cytoglobin.

Authors:  Djemel Hamdane; Laurent Kiger; Sylvia Dewilde; Brian N Green; Alessandra Pesce; Julien Uzan; Thorsten Burmester; Thomas Hankeln; Martino Bolognesi; Luc Moens; Michael C Marden
Journal:  J Biol Chem       Date:  2003-10-06       Impact factor: 5.157

10.  Heme axial methionine fluxionality in Hydrogenobacter thermophilus cytochrome c552.

Authors:  Linghao Zhong; Xin Wen; Terry M Rabinowitz; Brandy S Russell; Elizabeth F Karan; Kara L Bren
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-25       Impact factor: 11.205

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  12 in total

Review 1.  Structure and reactivity of hexacoordinate hemoglobins.

Authors:  Smita Kakar; Federico G Hoffman; Jay F Storz; Marian Fabian; Mark S Hargrove
Journal:  Biophys Chem       Date:  2010-09-21       Impact factor: 2.352

2.  Neuroglobin genetic polymorphisms and their relationship to functional outcomes after traumatic brain injury.

Authors:  Pei-Ying Chuang; Yvette P Conley; Samuel M Poloyac; David O Okonkwo; Dianxu Ren; Paula R Sherwood; Marilyn Hravnak; Sheila A Alexander
Journal:  J Neurotrauma       Date:  2010-06       Impact factor: 5.269

3.  Molecular modeling and dynamics simulation of a histidine-tagged cytochrome b₅.

Authors:  Ying-Wu Lin; Tian-Lei Ying; Li-Fu Liao
Journal:  J Mol Model       Date:  2010-07-11       Impact factor: 1.810

4.  Electrochemical Evidence for Neuroglobin Activity on NO at Physiological Concentrations.

Authors:  Stanislav Trashin; Mats de Jong; Evi Luyckx; Sylvia Dewilde; Karolien De Wael
Journal:  J Biol Chem       Date:  2016-07-08       Impact factor: 5.157

5.  Assignment of the ferriheme resonances of the high-spin forms of nitrophorins 1 and 4 by 1H NMR spectroscopy: comparison to structural data obtained from X-ray crystallography.

Authors:  Tatiana Kh Shokhireva; Kevin M Smith; Robert E Berry; Nikolai V Shokhirev; Celia A Balfour; Hongjun Zhang; F Ann Walker
Journal:  Inorg Chem       Date:  2007-01-08       Impact factor: 5.165

6.  Assignment of the ferriheme resonances of the low-spin complexes of nitrophorins 1 and 4 by (1)H and (13)C NMR spectroscopy: comparison to structural data obtained from X-ray crystallography.

Authors:  Tatiana Kh Shokhireva; Andrzej Weichsel; Kevin M Smith; Robert E Berry; Nikolai V Shokhirev; Celia A Balfour; Hongjun Zhang; William R Montfort; F Ann Walker
Journal:  Inorg Chem       Date:  2007-02-10       Impact factor: 5.165

7.  Role of calcium in metalloenzymes: effects of calcium removal on the axial ligation geometry and magnetic properties of the catalytic diheme center in MauG.

Authors:  Yan Chen; Sunil G Naik; J Krzystek; Sooim Shin; William H Nelson; Shenghui Xue; Jenny J Yang; Victor L Davidson; Aimin Liu
Journal:  Biochemistry       Date:  2012-02-16       Impact factor: 3.162

8.  Ligand preference and orientation in b- and c-type heme-binding proteins.

Authors:  Christian Fufezan; Jun Zhang; M R Gunner
Journal:  Proteins       Date:  2008-11-15

9.  Heme orientation modulates histidine dissociation and ligand binding kinetics in the hexacoordinated human neuroglobin.

Authors:  Anthony Bocahut; Valérie Derrien; Sophie Bernad; Pierre Sebban; Sophie Sacquin-Mora; Eric Guittet; Ewen Lescop
Journal:  J Biol Inorg Chem       Date:  2012-11-08       Impact factor: 3.358

10.  The influence of heme ruffling on spin densities in ferricytochromes c probed by heme core 13C NMR.

Authors:  Jesse G Kleingardner; Sarah E J Bowman; Kara L Bren
Journal:  Inorg Chem       Date:  2013-11-04       Impact factor: 5.165

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