Literature DB >> 17496029

Solution conformation of the His-47 to Ala-47 mutant of Pseudomonas stutzeri ZoBell ferrocytochrome c-551.

Qiaoli Liang1, Gregory T Miller, Chanda A Beeghley, Coyner B Graf, Russell Timkovich.   

Abstract

In the cytochrome c-551 family, the heme 17-propionate caboxylate group is always hydrogen bonded to an invariant Trp-56 and conserved residues (His and Arg mainly, Lys occasionally) at position 47. The mutation of His-47 to Ala-47 for Pseudomas stutzeri ZoBell cytochrome c-551 removes this otherwise invariant hydrogen bond. The solution structure of ferrous H47A has been solved based on NMR-derived constraints. Results indicate that the mutant has very similar main chain folding compared to wild-type. However, less efficient packing of residues in the mutant surrounding the heme propionates leads to more solvent exposure for both propionate groups, which may account for decreased stability of the mutant. The mutant has a reduction potential different from wild-type, and furthermore, the pH dependence of this potential is not the same as for wild-type. The structure of the mutant suggests that these changes are related to the loss of the residue-47 propionate hydrogen bond and the loss of charge on the side chain of residue 47.

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Year:  2007        PMID: 17496029      PMCID: PMC1948052          DOI: 10.1529/biophysj.106.102772

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  19 in total

1.  Effects of axial methionine coordination on the in-plane asymmetry of the heme electronic structure of cytochrome c.

Authors:  Naoki Tachiiri; Hikaru Hemmi; Shin-Ichi Joseph Takayama; Hajime Mita; Jun Hasegawa; Yoshihiro Sambongi; Yasuhiko Yamamoto
Journal:  J Biol Inorg Chem       Date:  2004-07-03       Impact factor: 3.358

Review 2.  Sequence variability in bacterial cytochromes c.

Authors:  R P Ambler
Journal:  Biochim Biophys Acta       Date:  1991-05-23

3.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

4.  Calculation of protein structures with ambiguous distance restraints. Automated assignment of ambiguous NOE crosspeaks and disulphide connectivities.

Authors:  M Nilges
Journal:  J Mol Biol       Date:  1995-02-03       Impact factor: 5.469

5.  Structure of cytochrome c551 from Pseudomonas aeruginosa refined at 1.6 A resolution and comparison of the two redox forms.

Authors:  Y Matsuura; T Takano; R E Dickerson
Journal:  J Mol Biol       Date:  1982-04-05       Impact factor: 5.469

6.  Structural basis for the variation of pH-dependent redox potentials of Pseudomonas cytochromes c-551.

Authors:  F A Leitch; G R Moore; G W Pettigrew
Journal:  Biochemistry       Date:  1984-04-10       Impact factor: 3.162

7.  Investigation of the structure of oxidized Pseudomonas aeruginosa cytochrome c-551 by NMR: comparison of observed paramagnetic shifts and calculated pseudocontact shifts.

Authors:  R Timkovich; M Cai
Journal:  Biochemistry       Date:  1993-11-02       Impact factor: 3.162

8.  Expression of Pseudomonas stutzeri Zobell cytochrome c-551 and its H47A variant in Escherichia coli.

Authors:  Gregory T Miller; Donald Q Mackay; Melissa S Standley; Sherry L Fields; Wendi M Clary; Russell Timkovich
Journal:  Protein Expr Purif       Date:  2003-06       Impact factor: 1.650

9.  Solution conformation of cytochrome c-551 from Pseudomonas stutzeri ZoBell determined by NMR.

Authors:  M Cai; R Timkovich
Journal:  Biophys J       Date:  1994-09       Impact factor: 4.033

10.  Heme axial methionine fluxionality in Hydrogenobacter thermophilus cytochrome c552.

Authors:  Linghao Zhong; Xin Wen; Terry M Rabinowitz; Brandy S Russell; Elizabeth F Karan; Kara L Bren
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-25       Impact factor: 11.205

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  1 in total

1.  Modulation of the ligand-field anisotropy in a series of ferric low-spin cytochrome c mutants derived from Pseudomonas aeruginosa cytochrome c-551 and Nitrosomonas europaea cytochrome c-552: a nuclear magnetic resonance and electron paramagnetic resonance study.

Authors:  Giorgio Zoppellaro; Espen Harbitz; Ravinder Kaur; Amy A Ensign; Kara L Bren; K Kristoffer Andersson
Journal:  J Am Chem Soc       Date:  2008-10-24       Impact factor: 15.419

  1 in total

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