Literature DB >> 15155856

Microfluidic device reads up to four consecutive base pairs in DNA sequencing-by-synthesis.

Emil P Kartalov1, Stephen R Quake.   

Abstract

We have developed the first fully integrated microfluidic system for DNA sequencing-by-synthesis. Using this chip and fluorescence detection, we have reliably sequenced up to 4 consecutive bps. The described sequencer can be integrated with other microfluidic components on the same chip to produce true lab-on-a-chip technology. The surface chemistry that was designed to anchor the DNA to elastomeric microchannels is useful in a broad range of studies and applications.

Mesh:

Substances:

Year:  2004        PMID: 15155856      PMCID: PMC419614          DOI: 10.1093/nar/gkh613

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  35 in total

1.  Single-molecule fluorescence observed with mercury lamp illumination.

Authors:  M Unger; E Kartalov; C S Chiu; H A Lester; S R Quake
Journal:  Biotechniques       Date:  1999-11       Impact factor: 1.993

2.  Sequence-specific detection of individual DNA strands using engineered nanopores.

Authors:  S Howorka; S Cheley; H Bayley
Journal:  Nat Biotechnol       Date:  2001-07       Impact factor: 54.908

3.  A nanoliter rotary device for polymerase chain reaction.

Authors:  Jian Liu; Markus Enzelberger; Stephen Quake
Journal:  Electrophoresis       Date:  2002-05       Impact factor: 3.535

4.  Solving the "world-to-chip" interface problem with a microfluidic matrix.

Authors:  Jian Liu; Carl Hansen; Stephen R Quake
Journal:  Anal Chem       Date:  2003-09-15       Impact factor: 6.986

5.  Fluorescent in situ sequencing on polymerase colonies.

Authors:  Robi D Mitra; Jay Shendure; Jerzy Olejnik; George M Church
Journal:  Anal Biochem       Date:  2003-09-01       Impact factor: 3.365

6.  DNA sequencing by delayed extraction-matrix-assisted laser desorption/ionization time of flight mass spectrometry.

Authors:  M T Roskey; P Juhasz; I P Smirnov; E J Takach; S A Martin; L A Haff
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-14       Impact factor: 11.205

7.  A sequencing method based on real-time pyrophosphate.

Authors:  M Ronaghi; M Uhlén; P Nyrén
Journal:  Science       Date:  1998-07-17       Impact factor: 47.728

8.  A photocleavable fluorescent nucleotide for DNA sequencing and analysis.

Authors:  Zengmin Li; Xiaopeng Bai; Hameer Ruparel; Sobin Kim; Nicholas J Turro; Jingyue Ju
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-06       Impact factor: 11.205

9.  Immobilization and detection of DNA on microfluidic chips.

Authors:  L M Shamansky; C B Davis; J K Stuart; W G Kuhr
Journal:  Talanta       Date:  2001-12-13       Impact factor: 6.057

10.  Surface modification of poly(dimethylsiloxane) microfluidic devices by ultraviolet polymer grafting.

Authors:  Shuwen Hu; Xueqin Ren; Mark Bachman; Christopher E Sims; G P Li; Nancy Allbritton
Journal:  Anal Chem       Date:  2002-08-15       Impact factor: 6.986

View more
  13 in total

1.  Microfluidic vias enable nested bioarrays and autoregulatory devices in Newtonian fluids.

Authors:  Emil P Kartalov; Christopher Walker; Clive R Taylor; W French Anderson; Axel Scherer
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-03       Impact factor: 11.205

Review 2.  Opportunities for microfluidic technologies in synthetic biology.

Authors:  Shelly Gulati; Vincent Rouilly; Xize Niu; James Chappell; Richard I Kitney; Joshua B Edel; Paul S Freemont; Andrew J deMello
Journal:  J R Soc Interface       Date:  2009-05-27       Impact factor: 4.118

3.  Experimentally validated quantitative linear model for the device physics of elastomeric microfluidic valves.

Authors:  Emil P Kartalov; Axel Scherer; Stephen R Quake; Clive R Taylor; W French Anderson
Journal:  J Appl Phys       Date:  2007       Impact factor: 2.546

Review 4.  New tools and new biology: recent miniaturized systems for molecular and cellular biology.

Authors:  Morgan Hamon; Jong Wook Hong
Journal:  Mol Cells       Date:  2013-12-02       Impact factor: 5.034

5.  Microfluidics-Based Chromosome Conformation Capture (3C) Technology for Examining Chromatin Organization with a Low Quantity of Cells.

Authors:  Chen Sun; Chang Lu
Journal:  Anal Chem       Date:  2018-03-08       Impact factor: 6.986

Review 6.  Transposases are the most abundant, most ubiquitous genes in nature.

Authors:  Ramy K Aziz; Mya Breitbart; Robert A Edwards
Journal:  Nucleic Acids Res       Date:  2010-03-09       Impact factor: 16.971

7.  An analysis of the feasibility of short read sequencing.

Authors:  Nava Whiteford; Niall Haslam; Gerald Weber; Adam Prügel-Bennett; Jonathan W Essex; Peter L Roach; Mark Bradley; Cameron Neylon
Journal:  Nucleic Acids Res       Date:  2005-11-07       Impact factor: 16.971

8.  Patterning of supported gold monolayers via chemical lift-off lithography.

Authors:  Liane S Slaughter; Kevin M Cheung; Sami Kaappa; Huan H Cao; Qing Yang; Thomas D Young; Andrew C Serino; Sami Malola; Jana M Olson; Stephan Link; Hannu Häkkinen; Anne M Andrews; Paul S Weiss
Journal:  Beilstein J Nanotechnol       Date:  2017-12-08       Impact factor: 3.649

9.  RNA-protein binding kinetics in an automated microfluidic reactor.

Authors:  William K Ridgeway; Effrosyni Seitaridou; Rob Phillips; James R Williamson
Journal:  Nucleic Acids Res       Date:  2009-11       Impact factor: 16.971

Review 10.  Miniaturized PCR chips for nucleic acid amplification and analysis: latest advances and future trends.

Authors:  Chunsun Zhang; Da Xing
Journal:  Nucleic Acids Res       Date:  2007-06-18       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.