Literature DB >> 15122888

Mixed regioselectivity in the Arg-177 mutants of Corynebacterium diphtheriae heme oxygenase as a consequence of in-plane heme disorder.

Yuhong Zeng1, Rahul Deshmukh, Gregori A Caignan, Richard A Bunce, Mario Rivera, Angela Wilks.   

Abstract

It has been reported that the R183E and R183D mutants of rat heme oxygenase-1 (r-HO-1) produce approximately 30% delta-biliverdin [Zhou, H., et al. (2000) J. Am. Chem. Soc. 122, 8311-8312]. Two plausible mechanisms were proposed to explain the observations. (a) Electrostatic repulsion between E183 (D183) and one of the heme propionates forces the heme to rotate, thereby placing the delta-meso carbon in a position that is susceptible to oxidation. (b) Rearrangement of the distal pocket structure is triggered by the formation of a hydrogen bond between E183 (D183) and K179. A change in the pK(a) for the Fe(III)-H(2)O to Fe(III)-OH transition of the mutants was interpreted to be consistent with rearrangement of the hydrogen bond network in the distal pocket. The large similarities between the high-frequency portion of the (1)H NMR spectra corresponding to the wild type and R183E and R183D mutants were interpreted to indicate that the heme in the mutants is not rotated to a significant extent. We have re-examined this issue by studying the corresponding R177 mutants in heme oxygenase from Corynebacterium diphtheriae (cd-HO). Replacing R177 with E or D results in the formation of approximately 55% alpha- and 45% delta-biliverdin, whereas the R177A mutant retains alpha-regioselectivity. In addition, the K13N/Y130F/R177A triple mutant catalyzed the formation of 60% delta- and 40% alpha-biliverdin, while single mutants K13N and Y130F did not appreciably change the regioselectivity of the reaction. The pK(a) of the Fe(III)-H(2)O to Fe(III)-OH transition in wild-type cd-HO is 9.1, and those of the R177E, R177D, R177A, and K13N/Y130F/R177A mutants are 9.4, 9.5, 9.2, and 8.0, respectively. Thus, no obvious correlation exists between the changes in pK(a) and the altered regioselectivity. NMR spectroscopic studies conducted with the R177D and R177E mutants of cd-HO revealed the presence of three heme isomers: a major (M) and a minor (m) heme orientational isomer related by a 180 degrees rotation about the alpha-gamma meso axis and an alternative seating (m') which is related to m by an 85 degrees in-plane rotation of the macrocycle. The in-plane rotation of m to acquire conformation m' is triggered by electrostatic repulsion between the side chains of D or E at position 177 and heme propionate-6. As a consequence, the delta-meso carbon in m' is placed in the position occupied by the alpha-meso carbon in m, where it is susceptible to hydroxylation and subsequent formation of delta-biliverdin.

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Year:  2004        PMID: 15122888     DOI: 10.1021/bi035970o

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

1.  Modulation of the axial water hydrogen-bonding properties by chemical modification of the substrate in resting state, substrate-bound heme oxygenase from Neisseria meningitidis; coupling to the distal H-bond network via ordered water molecules.

Authors:  Li-Hua Ma; Yangzhong Liu; Xuhong Zhang; Tadashi Yoshida; Kevin C Langry; Kevin M Smith; Gerd N La Mar
Journal:  J Am Chem Soc       Date:  2006-05-17       Impact factor: 15.419

2.  NMR studies of nitrophorin distal pocket side chain effects on the heme orientation and seating of NP2 as compared to NP1.

Authors:  Tatiana K Shokhireva; Robert E Berry; Hongjun Zhang; Nikolai V Shokhirev; F Ann Walker
Journal:  J Inorg Biochem       Date:  2011-06-17       Impact factor: 4.155

3.  Design of metal cofactors activated by a protein-protein electron transfer system.

Authors:  Takafumi Ueno; Norihiko Yokoi; Masaki Unno; Toshitaka Matsui; Yuichi Tokita; Masako Yamada; Masao Ikeda-Saito; Hiroshi Nakajima; Yoshihito Watanabe
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-12       Impact factor: 11.205

4.  Influence of substrate modification and C-terminal truncation on the active site structure of substrate-bound heme oxygenase from Neisseriae meningitidis. A 1H NMR study.

Authors:  Dungeng Peng; James D Satterlee; Li-Hua Ma; Jerry L Dallas; Kevin M Smith; Xuhong Zhang; Michihiko Sato; Gerd N La Mar
Journal:  Biochemistry       Date:  2011-09-21       Impact factor: 3.162

5.  Alteration of the regiospecificity of human heme oxygenase-1 by unseating of the heme but not disruption of the distal hydrogen bonding network.

Authors:  Jinling Wang; John P Evans; Hiroshi Ogura; Gerd N La Mar; Paul R Ortiz de Montellano
Journal:  Biochemistry       Date:  2006-01-10       Impact factor: 3.162

Review 6.  The heme environment of mouse neuroglobin: histidine imidazole plane orientations obtained from solution NMR and EPR spectroscopy as compared with X-ray crystallography.

Authors:  F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2006-04-04       Impact factor: 3.358

7.  Role of propionates in substrate binding to heme oxygenase from Neisseria meningitidis: a nuclear magnetic resonance study.

Authors:  Dungeng Peng; Li-Hua Ma; Kevin M Smith; Xuhong Zhang; Michihiko Sato; Gerd N La Mar
Journal:  Biochemistry       Date:  2012-08-30       Impact factor: 3.162

8.  Characterization of the spontaneous "aging" of the heme oxygenase from the pathological bacterium Neisseria meningitidis via cleavage of the C-terminus in contact with the substrate. Implications for functional studies and the crystal structure.

Authors:  Yangzhong Liu; Li-Hua Ma; Xuhong Zhang; Tadashi Yoshida; James D Satterlee; Gerd N La Mar
Journal:  Biochemistry       Date:  2006-03-28       Impact factor: 3.162

9.  1H NMR study of the effect of variable ligand on heme oxygenase electronic and molecular structure.

Authors:  Li-Hua Ma; Yangzhong Liu; Xuhong Zhang; Tadashi Yoshida; Gerd N La Mar
Journal:  J Inorg Biochem       Date:  2008-09-05       Impact factor: 4.155

10.  1H and 13C NMR spectroscopic studies of the ferriheme resonances of three low-spin complexes of wild-type nitrophorin 2 and nitrophorin 2(V24E) as a function of pH.

Authors:  Fei Yang; Markus Knipp; Tatiana K Shokhireva; Robert E Berry; Hongjun Zhang; F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2009-06-11       Impact factor: 3.358

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