Literature DB >> 14979711

Pre-steady-state measurement of intrinsic secondary tritium isotope effects associated with the homolysis of adenosylcobalamin and the formation of 5'-deoxyadensosine in glutamate mutase.

Mou-Chi Cheng1, E Neil G Marsh.   

Abstract

Glutamate mutase is one of a group of adenosylcobalamin-dependent enzymes that catalyze a variety of reactions that proceed through organic radical intermediates generated by homolytic fission of coenzyme's unique cobalt-carbon bond. For all the enzymes that have been examined, the homolysis step is kinetically indistinguishable from abstraction of hydrogen from the substrate (or protein), implying that deoxyadenosyl radical is formed only as a fleeting intermediate. To examine how these two steps are coupled together, we have used pre-steady-state, rapid quench techniques to measure the alpha-secondary tritium isotope effect associated with the formation of 5'-deoxyadenosine when the enzyme is reacted with [5'-(3)H]-adenosylcobalamin and L-glutamate. Surprisingly, a large inverse equilibrium isotope effect of 0.72 +/- 0.04 was found for the overall reaction, indicating that the 5'-C-H bonds become significantly stiffer on going from adenosylcobalamin to 5'-deoxyadenosine, even though the 5'-carbon remains formally sp(3) hybridized. The kinetic isotope effect for the formation of 5'-deoxyadenosine was 0.76 +/- 0.02, which suggests a late transition state for the reaction.

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Year:  2004        PMID: 14979711     DOI: 10.1021/bi036122w

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

1.  Nonperfect synchronization of reaction center rehybridization in the transition state of the hydride transfer catalyzed by dihydrofolate reductase.

Authors:  Jingzhi Pu; Shuhua Ma; Mireia Garcia-Viloca; Jiali Gao; Donald G Truhlar; Amnon Kohen
Journal:  J Am Chem Soc       Date:  2005-10-26       Impact factor: 15.419

2.  Hydrogen tunneling in adenosylcobalamin-dependent glutamate mutase: evidence from intrinsic kinetic isotope effects measured by intramolecular competition.

Authors:  Miri Yoon; Hangtian Song; Kristina Håkansson; E Neil G Marsh
Journal:  Biochemistry       Date:  2010-04-13       Impact factor: 3.162

Review 3.  Adenosyl radical: reagent and catalyst in enzyme reactions.

Authors:  E Neil G Marsh; Dustin P Patterson; Lei Li
Journal:  Chembiochem       Date:  2010-03-22       Impact factor: 3.164

Review 4.  Adenosylcobalamin enzymes: theory and experiment begin to converge.

Authors:  E Neil G Marsh; Gabriel D Román Meléndez
Journal:  Biochim Biophys Acta       Date:  2012-04-03

5.  Evidence for coupled motion and hydrogen tunneling of the reaction catalyzed by glutamate mutase.

Authors:  Mou-Chi Cheng; E Neil G Marsh
Journal:  Biochemistry       Date:  2007-01-23       Impact factor: 3.162

6.  Changes in the free energy profile of glutamate mutase imparted by the mutation of an active site arginine residue to lysine.

Authors:  Anjali Patwardhan; E Neil G Marsh
Journal:  Arch Biochem Biophys       Date:  2007-01-31       Impact factor: 4.013

7.  Reaction of adenosylcobalamin-dependent glutamate mutase with 2-thiolglutarate.

Authors:  Miri Yoon; Anjali Patwardhan; Chunhua Qiao; Steven O Mansoorabadi; Ann L Menefee; George H Reed; E Neil G Marsh
Journal:  Biochemistry       Date:  2006-09-26       Impact factor: 3.162

8.  Probing reversible chemistry in coenzyme B12 -dependent ethanolamine ammonia lyase with kinetic isotope effects.

Authors:  Alex R Jones; Julius Rentergent; Nigel S Scrutton; Sam Hay
Journal:  Chemistry       Date:  2015-05-07       Impact factor: 5.236

9.  Synthesis of Mono- and Di-Deuterated (2S, 3S)-3-Methylaspartic Acids to Facilitate Measurement of Intrinsic Kinetic Isotope Effects in Enzymes.

Authors:  Hyang-Yeol Lee; Miri Yoon; E Neil G Marsh
Journal:  Tetrahedron       Date:  2007-05-28       Impact factor: 2.457

10.  Role of active site residues in promoting cobalt-carbon bond homolysis in adenosylcobalamin-dependent mutases revealed through experiment and computation.

Authors:  Gabriel D Román-Meléndez; Patrick von Glehn; Jeremy N Harvey; Adrian J Mulholland; E Neil G Marsh
Journal:  Biochemistry       Date:  2013-12-20       Impact factor: 3.162

  10 in total

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