Literature DB >> 14968307

High-oleate peanut mutants result from a MITE insertion into the FAD2 gene.

M Patel1, S Jung, K Moore, G Powell, C Ainsworth, A Abbott.   

Abstract

A high-oleate trait in the cultivated peanut ( Arachis hypogaea L.) was reported to rely on the allelic composition of the two homeologous, microsomal oleoyl-PC desaturase genes ( ahFAD2A or ahFAD2B). The enzyme activity of either ahFAD2A or ahFAD2B is sufficient for a normal oleate phenotype, and a significant reduction in the levels of ahFAD2B and a mutation in ahFAD2A were reported to be responsible for the high-oleate phenotype in one chemically induced mutant (M2-225) and one derived from a naturally occurring (8-2122) mutant. Here, we report an insertion of the same miniature inverted-repeat transposable element (MITE) in the ahFAD2B gene in another chemically induced mutant (Mycogen-Flavo) and the previously characterized M2-225 mutant. In both cases, this MITE insertion in ahFAD2B causes a frameshift, resulting in a putatively truncated protein sequence in both mutants. The insertion of this MITE in ahFAD2B, in addition to the point mutation in ahFAD2A, appears to be the cause of the high-oleate phenotype in Mycogen-Flavo and M2-225 mutants. Utilizing sequences of the MITE, we developed a DNA marker strategy to differentiate the two insertion-containing mutants from the normal oleate peanut variety (AT-108) and the naturally occurring, high-oleate mutant 8-2122. Reverse transcript-PCR/differential digestion results reveal the expression of both ahFAD2A and ahFAD2B genes in Mycogen-Flavo mutant. This result is in contrast to the observation that ahFAD2B transcripts are greatly reduced in the M2-225 mutant having the MITE insertion further 3' in ahFAD2B gene.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 14968307     DOI: 10.1007/s00122-004-1590-3

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  37 in total

1.  DEC: a new miniature inverted-repeat transposable element from the genome of the beetle Tenebrio molitor.

Authors:  C Braquart; V Royer; H Bouhin
Journal:  Insect Mol Biol       Date:  1999-11       Impact factor: 3.585

2.  Unsaturated fatty acids selectively induce an inflammatory environment in human endothelial cells.

Authors:  Michal Toborek; Yong Woo Lee; Rosario Garrido; Simone Kaiser; Bernhard Hennig
Journal:  Am J Clin Nutr       Date:  2002-01       Impact factor: 7.045

Review 3.  Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells.

Authors:  A Jacobson; S W Peltz
Journal:  Annu Rev Biochem       Date:  1996       Impact factor: 23.643

4.  The high oleate trait in the cultivated peanut [Arachis hypogaea L.]. I. Isolation and characterization of two genes encoding microsomal oleoyl-PC desaturases.

Authors:  S Jung; D Swift; E Sengoku; M Patel; F Teulé; G Powell; K Moore; A Abbott
Journal:  Mol Gen Genet       Date:  2000-06

5.  The high oleate trait in the cultivated peanut [Arachis hypogaea L]. II. Molecular basis and genetics of the trait.

Authors:  S Jung; G Powell; K Moore; A Abbott
Journal:  Mol Gen Genet       Date:  2000-06

6.  Mobile inverted-repeat elements of the Tourist family are associated with the genes of many cereal grasses.

Authors:  T E Bureau; S R Wessler
Journal:  Proc Natl Acad Sci U S A       Date:  1994-02-15       Impact factor: 11.205

7.  Molecular identification of smg-4, required for mRNA surveillance in C. elegans.

Authors:  R Aronoff; R Baran; J Hodgkin
Journal:  Gene       Date:  2001-05-02       Impact factor: 3.688

8.  Bigfoot. a new family of MITE elements characterized from the Medicago genus.

Authors:  B Charrier; F Foucher; E Kondorosi; Y d'Aubenton-Carafa; C Thermes; A Kondorosi; P Ratet
Journal:  Plant J       Date:  1999-05       Impact factor: 6.417

9.  A novel group of families of short interspersed repetitive elements (SINEs) in Xenopus: evidence of a specific target site for DNA-mediated transposition of inverted-repeat SINEs.

Authors:  K Unsal; G T Morgan
Journal:  J Mol Biol       Date:  1995-05-12       Impact factor: 5.469

10.  Eight novel families of miniature inverted repeat transposable elements in the African malaria mosquito, Anopheles gambiae.

Authors:  Z Tu
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-06       Impact factor: 11.205

View more
  29 in total

1.  Next-generation transcriptome sequencing, SNP discovery and validation in four market classes of peanut, Arachis hypogaea L.

Authors:  Ratan Chopra; Gloria Burow; Andrew Farmer; Joann Mudge; Charles E Simpson; Thea A Wilkins; Michael R Baring; Naveen Puppala; Kelly D Chamberlin; Mark D Burow
Journal:  Mol Genet Genomics       Date:  2015-02-07       Impact factor: 3.291

2.  Whole genome scan detects an allelic variant of fad2 associated with increased oleic acid levels in maize.

Authors:  André Beló; Peizhong Zheng; Stanley Luck; Bo Shen; David J Meyer; Bailin Li; Scott Tingey; Antoni Rafalski
Journal:  Mol Genet Genomics       Date:  2007-10-13       Impact factor: 3.291

3.  Enhancing plant seed oils for human nutrition.

Authors:  Howard G Damude; Anthony J Kinney
Journal:  Plant Physiol       Date:  2008-07       Impact factor: 8.340

4.  An insertion of oleate desaturase homologous sequence silences via siRNA the functional gene leading to high oleic acid content in sunflower seed oil.

Authors:  Séverine Lacombe; Irénée Souyris; André J Bervillé
Journal:  Mol Genet Genomics       Date:  2008-10-28       Impact factor: 3.291

5.  Bioinformatics study of delta-12 fatty acid desaturase 2 (FAD2) gene in oilseeds.

Authors:  Fatemeh Dehghan Nayeri; Kazem Yarizade
Journal:  Mol Biol Rep       Date:  2014-05-11       Impact factor: 2.316

Review 6.  Miniature inverted-repeat transposable elements (MITEs), derived insertional polymorphism as a tool of marker systems for molecular plant breeding.

Authors:  B Nandini
Journal:  Mol Biol Rep       Date:  2020-03-11       Impact factor: 2.316

Review 7.  Modulating signaling networks by CRISPR/Cas9-mediated transposable element insertion.

Authors:  Luis María Vaschetto
Journal:  Curr Genet       Date:  2017-10-14       Impact factor: 3.886

8.  Isolation and characterization of fatty acid desaturase genes from peanut (Arachis hypogaea L.).

Authors:  Xiaoyuan Chi; Qingli Yang; Lijuan Pan; Mingna Chen; Yanan He; Zhen Yang; Shanlin Yu
Journal:  Plant Cell Rep       Date:  2011-03-16       Impact factor: 4.570

9.  Isolation and characterization of a stress-dependent plastidial delta12 fatty acid desaturase from the Antarctic microalga Chlorella vulgaris NJ-7.

Authors:  Yandu Lu; Xiaoyuan Chi; Zhaoxin Li; Qingli Yang; Fuchao Li; Shaofang Liu; Qinhua Gan; Song Qin
Journal:  Lipids       Date:  2010-01-20       Impact factor: 1.880

10.  Heterochromatin evolution in Arachis investigated through genome-wide analysis of repetitive DNA.

Authors:  Sergio S Samoluk; Laura M I Chalup; Carolina Chavarro; Germán Robledo; David J Bertioli; Scott A Jackson; Guillermo Seijo
Journal:  Planta       Date:  2019-01-24       Impact factor: 4.116

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.