Literature DB >> 8108422

Mobile inverted-repeat elements of the Tourist family are associated with the genes of many cereal grasses.

T E Bureau1, S R Wessler.   

Abstract

Tourist was originally described as a 128-bp insertion mutation in the maize wx-B2 allele. Subsequent analysis revealed that Tourist elements are in the introns or flanking sequences of 11 maize genes and a single barley gene. In this study we report that Tourist elements are frequently associated with the wild-type genes of two other grasses, rice and sorghum. Six of 35 rice and 5 of 8 sorghum complete gene sequences reported to date contain Tourist elements. Furthermore, 11 additional maize genes have been found to contain Tourist elements, bringing the current total of elements associated with maize genes to 23. Sequence comparison of Tourist elements has led to the identification of four subfamilies, designated A-D. Evidence is presented for the recent mobility of elements in three of these subfamilies and in three of the four grass species. These data suggest that Tourist elements are highly repetitive in the genomes of some and perhaps all members of the grasses.

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Year:  1994        PMID: 8108422      PMCID: PMC43168          DOI: 10.1073/pnas.91.4.1411

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

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Authors:  P L Deininger; M A Batzer; C A Hutchison; M H Edgell
Journal:  Trends Genet       Date:  1992-09       Impact factor: 11.639

2.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

3.  Automated DNA sequencing of the human HPRT locus.

Authors:  A Edwards; H Voss; P Rice; A Civitello; J Stegemann; C Schwager; J Zimmermann; H Erfle; C T Caskey; W Ansorge
Journal:  Genomics       Date:  1990-04       Impact factor: 5.736

4.  The sequence of the rice phytochrome gene.

Authors:  S A Kay; B Keith; K Shinozaki; N H Chua
Journal:  Nucleic Acids Res       Date:  1989-04-11       Impact factor: 16.971

5.  Nucleotide sequence of a tRNA(Gly) gene from Sorghum bicolor.

Authors:  D P Ma; Y W Yang
Journal:  Nucleic Acids Res       Date:  1988-04-25       Impact factor: 16.971

6.  Repeated sequences in DNA. Hundreds of thousands of copies of DNA sequences have been incorporated into the genomes of higher organisms.

Authors:  R J Britten; D E Kohne
Journal:  Science       Date:  1968-08-09       Impact factor: 47.728

7.  Production of single-stranded plasmid DNA.

Authors:  J Vieira; J Messing
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

8.  Repetitive DNA and chromosome evolution in plants.

Authors:  R B Flavell
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1986-01-29       Impact factor: 6.237

9.  A comprehensive set of sequence analysis programs for the VAX.

Authors:  J Devereux; P Haeberli; O Smithies
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

10.  Oleosin KD 18 on the surface of oil bodies in maize. Genomic and cDNA sequences and the deduced protein structure.

Authors:  R D Qu; A H Huang
Journal:  J Biol Chem       Date:  1990-02-05       Impact factor: 5.157

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  89 in total

Review 1.  Transposons and genome evolution in plants.

Authors:  N Fedoroff
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-20       Impact factor: 11.205

Review 2.  Comparative genome organization in plants: from sequence and markers to chromatin and chromosomes.

Authors:  J S Heslop-Harrison
Journal:  Plant Cell       Date:  2000-05       Impact factor: 11.277

Review 3.  Transposable element contributions to plant gene and genome evolution.

Authors:  J L Bennetzen
Journal:  Plant Mol Biol       Date:  2000-01       Impact factor: 4.076

4.  Insertion preference of maize and rice miniature inverted repeat transposable elements as revealed by the analysis of nested elements.

Authors:  N Jiang; S R Wessler
Journal:  Plant Cell       Date:  2001-11       Impact factor: 11.277

5.  PIFs meet Tourists and Harbingers: a superfamily reunion.

Authors:  J Jurka; V V Kapitonov
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-23       Impact factor: 11.205

6.  Tc8, a Tourist-like transposon in Caenorhabditis elegans.

Authors:  Q H Le; K Turcotte; T Bureau
Journal:  Genetics       Date:  2001-07       Impact factor: 4.562

7.  The highly recombinogenic bz locus lies in an unusually gene-rich region of the maize genome.

Authors:  H Fu; W Park; X Yan; Z Zheng; B Shen; H K Dooner
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

8.  The MITE family heartbreaker (Hbr): molecular markers in maize.

Authors:  A M Casa; C Brouwer; A Nagel; L Wang; Q Zhang; S Kresovich; S R Wessler
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-29       Impact factor: 11.205

9.  Different types and rates of genome evolution detected by comparative sequence analysis of orthologous segments from four cereal genomes.

Authors:  Wusirika Ramakrishna; Jorge Dubcovsky; Yong-Jin Park; Carlos Busso; John Emberton; Phillip SanMiguel; Jeffrey L Bennetzen
Journal:  Genetics       Date:  2002-11       Impact factor: 4.562

10.  Structural analysis of the maize rp1 complex reveals numerous sites and unexpected mechanisms of local rearrangement.

Authors:  Wusirika Ramakrishna; John Emberton; Matthew Ogden; Phillip SanMiguel; Jeffrey L Bennetzen
Journal:  Plant Cell       Date:  2002-12       Impact factor: 11.277

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