Literature DB >> 29032444

Modulating signaling networks by CRISPR/Cas9-mediated transposable element insertion.

Luis María Vaschetto1,2.   

Abstract

In a recent past, transposable elements (TEs) were referred to as selfish genetic components only capable of copying themselves with the aim of increasing the odds of being inherited. Nonetheless, TEs have been initially proposed as positive control elements acting in synergy with the host. Nowadays, it is well known that TE movement into host genome comprises an important evolutionary mechanism capable of increasing the adaptive fitness. As insights into TE functioning are increasing day to day, the manipulation of transposition has raised an interesting possibility of setting the host functions, although the lack of appropriate genome engineering tools has unpaved it. Fortunately, the emergence of genome editing technologies based on programmable nucleases, and especially the arrival of a multipurpose RNA-guided Cas9 endonuclease system, has made it possible to reconsider this challenge. For such purpose, a particular type of transposons referred to as miniature inverted-repeat transposable elements (MITEs) has shown a series of interesting characteristics for designing functional drivers. Here, recent insights into MITE elements and versatile RNA-guided CRISPR/Cas9 genome engineering system are given to understand how to deploy the potential of TEs for control of the host transcriptional activity.

Keywords:  CRISPR/Cas9; Genome editing; Miniature inverted transposable elements; TE-based drives; Transcriptional control; Transposable element amplification

Mesh:

Substances:

Year:  2017        PMID: 29032444     DOI: 10.1007/s00294-017-0765-9

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  73 in total

1.  Identification of genes that are associated with DNA repeats in prokaryotes.

Authors:  Ruud Jansen; Jan D A van Embden; Wim Gaastra; Leo M Schouls
Journal:  Mol Microbiol       Date:  2002-03       Impact factor: 3.501

2.  Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity.

Authors:  F Ann Ran; Patrick D Hsu; Chie-Yu Lin; Jonathan S Gootenberg; Silvana Konermann; Alexandro E Trevino; David A Scott; Azusa Inoue; Shogo Matoba; Yi Zhang; Feng Zhang
Journal:  Cell       Date:  2013-08-29       Impact factor: 41.582

3.  The significance of responses of the genome to challenge.

Authors:  B McClintock
Journal:  Science       Date:  1984-11-16       Impact factor: 47.728

4.  Epigenetic silencing of transposable elements: a trade-off between reduced transposition and deleterious effects on neighboring gene expression.

Authors:  Jesse D Hollister; Brandon S Gaut
Journal:  Genome Res       Date:  2009-05-28       Impact factor: 9.043

Review 5.  Transposable elements and the evolution of regulatory networks.

Authors:  Cédric Feschotte
Journal:  Nat Rev Genet       Date:  2008-05       Impact factor: 53.242

6.  Manipulating piggyBac transposon chromosomal integration site selection in human cells.

Authors:  Claudia Kettlun; Daniel L Galvan; Alfred L George; Aparna Kaja; Matthew H Wilson
Journal:  Mol Ther       Date:  2011-07-05       Impact factor: 11.454

7.  A two-edged role for the transposable element Kiddo in the rice ubiquitin2 promoter.

Authors:  Guojun Yang; Yeon-Hee Lee; Yiming Jiang; Xiangyu Shi; Sunee Kertbundit; Timothy C Hall
Journal:  Plant Cell       Date:  2005-04-01       Impact factor: 11.277

8.  The rice miniature inverted repeat transposable element mPing is an effective insertional mutagen in soybean.

Authors:  C Nathan Hancock; Feng Zhang; Kristen Floyd; Aaron O Richardson; Peter Lafayette; Donna Tucker; Susan R Wessler; Wayne A Parrott
Journal:  Plant Physiol       Date:  2011-08-15       Impact factor: 8.340

9.  The plant MITE mPing is mobilized in anther culture.

Authors:  Kazuhiro Kikuchi; Kazuki Terauchi; Masamitsu Wada; Hiro-Yuki Hirano
Journal:  Nature       Date:  2003-01-09       Impact factor: 49.962

10.  A CRISPR-Cas9 gene drive system targeting female reproduction in the malaria mosquito vector Anopheles gambiae.

Authors:  Andrew Hammond; Roberto Galizi; Kyros Kyrou; Alekos Simoni; Carla Siniscalchi; Dimitris Katsanos; Matthew Gribble; Dean Baker; Eric Marois; Steven Russell; Austin Burt; Nikolai Windbichler; Andrea Crisanti; Tony Nolan
Journal:  Nat Biotechnol       Date:  2015-12-07       Impact factor: 54.908

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  3 in total

Review 1.  Border collies of the genome: domestication of an autonomous retrovirus-like transposon.

Authors:  M Joan Curcio
Journal:  Curr Genet       Date:  2018-06-21       Impact factor: 3.886

Review 2.  Scarless genome editing: progress towards understanding genotype-phenotype relationships.

Authors:  Gregory L Elison; Murat Acar
Journal:  Curr Genet       Date:  2018-06-05       Impact factor: 3.886

Review 3.  Yeast genetic interaction screens in the age of CRISPR/Cas.

Authors:  Neil R Adames; Jenna E Gallegos; Jean Peccoud
Journal:  Curr Genet       Date:  2018-09-25       Impact factor: 3.886

  3 in total

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