Literature DB >> 14505406

The hydroxide complex of Pseudomonas aeruginosa heme oxygenase as a model of the low-spin iron(III) hydroperoxide intermediate in heme catabolism: 13C NMR spectroscopic studies suggest the active participation of the heme in macrocycle hydroxylation.

Gregori A Caignan1, Rahul Deshmukh, Yuhong Zeng, Angela Wilks, Richard A Bunce, Mario Rivera.   

Abstract

13C NMR spectroscopic studies have been conducted with the hydroxide complex of Pseudomonas aeruginosa heme oxygenase (Fe(III)-OH), where OH(-) has been used as a model of the OOH(-) ligand to gain insights regarding the elusive ferric hydroperoxide (Fe(III)-OOH) intermediate in heme catabolism at ambient temperatures. Analysis of the heme core carbon resonances revealed that the coordination of hydroxide in the distal site of the enzyme results in the formation of at least three populations of Fe(III)-OH complexes with distinct electronic configurations and nonplanar ring distortions that are in slow exchange relative to the NMR time scale. The most abundant population exhibits a spin crossover between S = (1)/(2) and S = (3)/(2) spin states, and the two less abundant populations exhibit pure, S = (3)/(2) and S = (1)/(2), (d(xy)())(1) electronic configurations. We propose that the highly organized network of water molecules in the distal pocket of heme oxygenase, by virtue of donating a hydrogen bond to the coordinated hydroxide ligand, lowers its ligand field strength, thereby increasing the field strength of the porphyrin (equatorial) ligand, which results in nonplanar deformations of the macrocycle. This tendency to deform from planarity, which is imparted by the ligand field strength of the coordinated OH(-), is likely reinforced by the flexibility of the distal pocket in HO. These findings suggest that if the ligand field strength of the coordinated OOH(-) in heme oxygenase is modulated in a similar manner, the resultant large spin density at the meso carbons and nonplanar deformations of the pophyrin ring prime the macrocycle to actively participate in its own hydroxylation.

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Year:  2003        PMID: 14505406     DOI: 10.1021/ja036147i

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  17 in total

1.  The mechanism of heme transfer from the cytoplasmic heme binding protein PhuS to the delta-regioselective heme oxygenase of Pseudomonas aeruginosa.

Authors:  Mehul N Bhakta; Angela Wilks
Journal:  Biochemistry       Date:  2006-09-26       Impact factor: 3.162

2.  Electronic properties of the highly ruffled heme bound to the heme degrading enzyme IsdI.

Authors:  Shin-ichi J Takayama; Georgia Ukpabi; Michael E P Murphy; A Grant Mauk
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-25       Impact factor: 11.205

3.  Modulation of the axial water hydrogen-bonding properties by chemical modification of the substrate in resting state, substrate-bound heme oxygenase from Neisseria meningitidis; coupling to the distal H-bond network via ordered water molecules.

Authors:  Li-Hua Ma; Yangzhong Liu; Xuhong Zhang; Tadashi Yoshida; Kevin C Langry; Kevin M Smith; Gerd N La Mar
Journal:  J Am Chem Soc       Date:  2006-05-17       Impact factor: 15.419

4.  Spectroscopic Evidence for Electronic Control of Heme Hydroxylation by IsdG.

Authors:  Matthew A Conger; Amanda R Cornetta; Matthew D Liptak
Journal:  Inorg Chem       Date:  2019-11-06       Impact factor: 5.165

5.  Distinct reaction pathways followed upon reduction of oxy-heme oxygenase and oxy-myoglobin as characterized by Mössbauer spectroscopy.

Authors:  Ricardo Garcia-Serres; Roman M Davydov; Toshitaka Matsui; Masao Ikeda-Saito; Brian M Hoffman; Boi Hanh Huynh
Journal:  J Am Chem Soc       Date:  2007-02-07       Impact factor: 15.419

6.  Coupling of the distal hydrogen bond network to the exogenous ligand in substrate-bound, resting state human heme oxygenase.

Authors:  Dungeng Peng; Hiroshi Ogura; Wenfeng Zhu; Li-Hua Ma; John P Evans; Paul R Ortiz de Montellano; Gerd N La Mar
Journal:  Biochemistry       Date:  2009-12-01       Impact factor: 3.162

7.  Assignment of Ferriheme Resonances for High- and Low-Spin Forms of Nitrophorin 3 by H and C NMR Spectroscopy and Comparison to Nitrophorin 2: Heme Pocket Structural Similarities and Differences.

Authors:  Tatiana Kh Shokhireva; Robert E Berry; Hongjun Zhang; Nikolai V Shokhirev; F Ann Walker
Journal:  Inorganica Chim Acta       Date:  2008-03-03       Impact factor: 2.545

Review 8.  The chemistry and biochemistry of heme c: functional bases for covalent attachment.

Authors:  Sarah E J Bowman; Kara L Bren
Journal:  Nat Prod Rep       Date:  2008-09-09       Impact factor: 13.423

9.  1H NMR study of the effect of variable ligand on heme oxygenase electronic and molecular structure.

Authors:  Li-Hua Ma; Yangzhong Liu; Xuhong Zhang; Tadashi Yoshida; Gerd N La Mar
Journal:  J Inorg Biochem       Date:  2008-09-05       Impact factor: 4.155

10.  1H and 13C NMR spectroscopic studies of the ferriheme resonances of three low-spin complexes of wild-type nitrophorin 2 and nitrophorin 2(V24E) as a function of pH.

Authors:  Fei Yang; Markus Knipp; Tatiana K Shokhireva; Robert E Berry; Hongjun Zhang; F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2009-06-11       Impact factor: 3.358

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