Literature DB >> 14499909

Preferential interactions of urea with lysozyme and their linkage to protein denaturation.

Serge N Timasheff1, Guifu Xie.   

Abstract

The interactions involved in the denaturation of lysozyme in the presence of urea were examined by thermal transition studies and measurements of preferential interactions of urea with the protein at pH 7.0, where it remains native up to 9.3 M urea, and at pH 2.0, where it undergoes a transition between 2.5 and 5.0 M urea. The destabilization of lysozyme by urea was found to follow the linear dependence on urea molar concentration, M(u), DeltaG(u)(o)=DeltaG(w)(o)-2.1 M(u), over the combined data, where DeltaG(u)(o) and DeltaG(w)(o) are the standard free energy changes of the N right harpoon over left harpoon D reaction in urea and water, respectively. Combination with the measured preferential binding gave the result that the increment of preferential binding, deltaGamma(23)=Gamma(23)(D)-Gamma(23)(N), is also linear in M(u). A temperature dependence study of preferential interactions permitted the evaluation of the transfer enthalpy, DeltaHmacr;(2,tr)(o), and entropy, DeltaSmacr;(2,tr)(o) of lysozyme from water into urea in both the native and denatured states. These values were found to be consistent with the enthalpy and entropy of formation of inter urea hydrogen bonds (Schellman, 1955; Kauzmann, 1959), with estimated values of DeltaHmacr;(2,tr)(o)=ca. -2.5 kcal mol(-1) and DeltaSmacr;(2,tr)(o)=ca. -7.0 e.u. per site. Analysis of the results led to the conclusion that the stabilization of the denatured form was predominantly by preferential binding to newly exposed peptide groups. Combination with the knowledge that stabilizing osmolytes act by preferential exclusion from peptide groups (Liu and Bolen, 1995) has led to the general conclusion that both the stabilization and destabilization of proteins by co-solvents are controlled predominantly by preferential interactions with peptide groups newly exposed on denaturation.

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Year:  2003        PMID: 14499909     DOI: 10.1016/s0301-4622(03)00106-6

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  26 in total

1.  A protein molecule in a mixed solvent: the preferential binding parameter via the Kirkwood-Buff theory.

Authors:  Ivan L Shulgin; Eli Ruckenstein
Journal:  Biophys J       Date:  2005-11-04       Impact factor: 4.033

2.  Protein folding, stability, and solvation structure in osmolyte solutions.

Authors:  Jörg Rösgen; B Montgomery Pettitt; David Wayne Bolen
Journal:  Biophys J       Date:  2005-08-19       Impact factor: 4.033

3.  Chemical potential derivatives and preferential interaction parameters in biological systems from Kirkwood-Buff theory.

Authors:  Paul E Smith
Journal:  Biophys J       Date:  2006-05-05       Impact factor: 4.033

4.  Protein phase diagrams II: nonideal behavior of biochemical reactions in the presence of osmolytes.

Authors:  Allan Chris M Ferreon; Josephine C Ferreon; D Wayne Bolen; Jörg Rösgen
Journal:  Biophys J       Date:  2006-10-06       Impact factor: 4.033

5.  An analysis of the molecular origin of osmolyte-dependent protein stability.

Authors:  Jörg Rösgen; B Montgomery Pettitt; David Wayne Bolen
Journal:  Protein Sci       Date:  2007-02-27       Impact factor: 6.725

Review 6.  Recent applications of Kirkwood-Buff theory to biological systems.

Authors:  Veronica Pierce; Myungshim Kang; Mahalaxmi Aburi; Samantha Weerasinghe; Paul E Smith
Journal:  Cell Biochem Biophys       Date:  2007-11-28       Impact factor: 2.194

7.  Stability of beta-lactoglobulin A in the presence of sugar osmolytes estimated from their guanidinium chloride-induced transition curves.

Authors:  Zohreh Saadati; Abdol-Khalegh Bordbar
Journal:  Protein J       Date:  2008-12       Impact factor: 2.371

8.  Membrane protein stability can be compromised by detergent interactions with the extramembranous soluble domains.

Authors:  Zhengrong Yang; Chi Wang; Qingxian Zhou; Jianli An; Ellen Hildebrandt; Luba A Aleksandrov; John C Kappes; Lawrence J DeLucas; John R Riordan; Ina L Urbatsch; John F Hunt; Christie G Brouillette
Journal:  Protein Sci       Date:  2014-05-03       Impact factor: 6.725

9.  Osmolyte perturbation reveals conformational equilibria in spin-labeled proteins.

Authors:  Carlos J López; Mark R Fleissner; Zhefeng Guo; Ana K Kusnetzow; Wayne L Hubbell
Journal:  Protein Sci       Date:  2009-08       Impact factor: 6.725

10.  Osmolytes modulate conformational exchange in solvent-exposed regions of membrane proteins.

Authors:  Ricardo H Flores Jiménez; Marie-Ange Do Cao; Miyeon Kim; David S Cafiso
Journal:  Protein Sci       Date:  2010-02       Impact factor: 6.725

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