Literature DB >> 1347970

PCR amplification of alleles at the DIS80 locus: comparison of a Finnish and a North American Caucasian population sample, and forensic casework evaluation.

A Sajantila1, B Budowle, M Ström, V Johnsson, M Lukka, L Peltonen, C Ehnholm.   

Abstract

Allele and genotype frequencies for the highly polymorphic D1S80 locus were determined in a Finnish population sample by using PCR followed by high-resolution PAGE and silver staining, a procedure called the amplified-fragment-length polymorphism (Amp-FLP) technique. In 140 unrelated Finnish individuals 15 alleles and 43 phenotypes were observed. The D1S80 locus demonstrated a heterozygosity of .77, and the power of discrimination was .92 in this sample representing a genetically isolated Finnish population. The distribution of observed genotypes conformed to Hardy-Weinberg expectations. In 36 mother-child pairs Mendelian inheritance for the alleles at the D1S80 locus could be demonstrated in all cases, and no mutations were observed. The usefulness of the D1S80 locus for forensic casework was assessed by using Amp-FLP analysis of the D1S80 locus in 36 forensic cases including 18 rapes, 14 homicides, and 4 other violent crimes. In most cases valuable information was obtained using the Amp-FLP technique, and in no case was there indication of either false-positive or false-negative results.

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Year:  1992        PMID: 1347970      PMCID: PMC1682638     

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  27 in total

1.  Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia.

Authors:  R K Saiki; S Scharf; F Faloona; K B Mullis; G T Horn; H A Erlich; N Arnheim
Journal:  Science       Date:  1985-12-20       Impact factor: 47.728

2.  Variable number of tandem repeat (VNTR) markers for human gene mapping.

Authors:  Y Nakamura; M Leppert; P O'Connell; R Wolff; T Holm; M Culver; C Martin; E Fujimoto; M Hoff; E Kumlin
Journal:  Science       Date:  1987-03-27       Impact factor: 47.728

3.  Rapid typing of tandemly repeated hypervariable loci by the polymerase chain reaction: application to the apolipoprotein B 3' hypervariable region.

Authors:  E Boerwinkle; W J Xiong; E Fourest; L Chan
Journal:  Proc Natl Acad Sci U S A       Date:  1989-01       Impact factor: 11.205

4.  Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction.

Authors:  K B Mullis; F A Faloona
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

5.  Characterization of a panel of highly variable minisatellites cloned from human DNA.

Authors:  Z Wong; V Wilson; I Patel; S Povey; A J Jeffreys
Journal:  Ann Hum Genet       Date:  1987-10       Impact factor: 1.670

6.  Amplification of a highly polymorphic VNTR segment by the polymerase chain reaction.

Authors:  G T Horn; B Richards; K W Klinger
Journal:  Nucleic Acids Res       Date:  1989-03-11       Impact factor: 16.971

7.  Sampling variances of heterozygosity and genetic distance.

Authors:  M Nei; A K Roychoudhury
Journal:  Genetics       Date:  1974-02       Impact factor: 4.562

8.  DNA typing from single hairs.

Authors:  R Higuchi; C H von Beroldingen; G F Sensabaugh; H A Erlich
Journal:  Nature       Date:  1988-04-07       Impact factor: 49.962

9.  Forensic application of DNA 'fingerprints'.

Authors:  P Gill; A J Jeffreys; D J Werrett
Journal:  Nature       Date:  1985 Dec 12-18       Impact factor: 49.962

10.  Radioimmunoassay of human prostate-specific acid phosphatase. A sensitive and specific assay for semen detection in forensic medicine.

Authors:  P Vihko; K Mattila; C Ehnholm
Journal:  Am J Clin Pathol       Date:  1981-02       Impact factor: 2.493

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  21 in total

1.  Genetic differences at four DNA typing loci in Finnish, Italian, and mixed Caucasian populations.

Authors:  D E Krane; R W Allen; S A Sawyer; D A Petrov; D L Hartl
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-15       Impact factor: 11.205

2.  Characteristics of polymorphism at a VNTR locus 3' to the apolipoprotein B gene in five human populations.

Authors:  R Deka; R Chakraborty; S DeCroo; F Rothhammer; S A Barton; R E Ferrell
Journal:  Am J Hum Genet       Date:  1992-12       Impact factor: 11.025

3.  Composite PAGE: an alternate method for increased separation of amplified short tandem repeat alleles.

Authors:  M Lorente; J A Lorente; M R Wilson; B Budowle; E Villanueva
Journal:  Int J Legal Med       Date:  1993       Impact factor: 2.686

4.  A HinfI polymorphism in the 5' flanking region of the human VNTR locus D1S80.

Authors:  A Alonso; P Martin; C Albarrán; M Sancho
Journal:  Int J Legal Med       Date:  1995       Impact factor: 2.686

5.  The genetic relationship between the Finns and the Finnish Saami (Lapps): analysis of nuclear DNA and mtDNA.

Authors:  P Lahermo; A Sajantila; P Sistonen; M Lukka; P Aula; L Peltonen; M L Savontaus
Journal:  Am J Hum Genet       Date:  1996-06       Impact factor: 11.025

6.  Paternal and maternal DNA lineages reveal a bottleneck in the founding of the Finnish population.

Authors:  A Sajantila; A H Salem; P Savolainen; K Bauer; C Gierig; S Pääbo
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-15       Impact factor: 11.205

7.  Metabolomic profiling of bloodstains on various absorbent and non-absorbent surfaces.

Authors:  Hyo-Jin Kim; Yoo-Jin Lee; Seungyeon Lee; You-Rim Lee; Hyunsong Son; Miji Shin; Hyebin Choi; Jaehee Yu; Jiyeong Lee; Hee-Gyoo Kang
Journal:  Anal Bioanal Chem       Date:  2020-01-18       Impact factor: 4.142

8.  Identification of individuals by analysis of biallelic DNA markers, using PCR and solid-phase minisequencing.

Authors:  A C Syvänen; A Sajantila; M Lukka
Journal:  Am J Hum Genet       Date:  1993-01       Impact factor: 11.025

9.  Improved separation of PCR amplified VNTR alleles by a vertical polyacrylamide gel electrophoresis.

Authors:  A Sajantila; M Lukka
Journal:  Int J Legal Med       Date:  1993       Impact factor: 2.686

10.  HUMTH01: amplification, species specificity, population genetics and forensic applications.

Authors:  R A van Oorschot; S J Gutowski; S L Robinson
Journal:  Int J Legal Med       Date:  1994       Impact factor: 2.686

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