Literature DB >> 12944255

Mathematical model of the spatio-temporal dynamics of second messengers in visual transduction.

D Andreucci1, P Bisegna, G Caruso, H E Hamm, E DiBenedetto.   

Abstract

A model describing the role of transversal and longitudinal diffusion of cGMP and Ca(2+) in signaling in the rod outer segment of vertebrates is developed. Utilizing a novel notion of surface-volume reaction and the mathematical theories of homogenization and concentrated capacity, the diffusion of cGMP and Ca(2+) in the inter-disc spaces is shown to be reducible to a one-parameter family of diffusion processes taking place on a single rod cross section; whereas the diffusion in the outer shell is shown to be reducible to a diffusion on a cylindrical surface. Moreover, the exterior flux of the former serves as a source term for the latter, alleviating the assumption of a well-stirred cytosol. A previous model of visual transduction that assumes a well-stirred rod outer segment cytosol (and thus contains no spatial information) can be recovered from this model by imposing a "bulk" assumption. The model shows that upon activation of a single rhodopsin, cGMP changes are local, and exhibit both a longitudinal and a transversal component. Consequently, membrane current is also highly localized. The spatial spread of the single photon response along the longitudinal axis of the outer segment is predicted to be 3-5 microm, consistent with experimental data. This approach represents a tool to analyze point-wise signaling dynamics without requiring averaging over the entire cell by global Michaelis-Menten kinetics.

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Year:  2003        PMID: 12944255      PMCID: PMC1303314          DOI: 10.1016/S0006-3495(03)74570-6

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  31 in total

1.  From molecular to modular cell biology.

Authors:  L H Hartwell; J J Hopfield; S Leibler; A W Murray
Journal:  Nature       Date:  1999-12-02       Impact factor: 49.962

2.  Longitudinal spread of second messenger signals in isolated rod outer segments of lizards.

Authors:  M Gray-Keller; W Denk; B Shraiman; P B Detwiler
Journal:  J Physiol       Date:  1999-09-15       Impact factor: 5.182

3.  The gain of rod phototransduction: reconciliation of biochemical and electrophysiological measurements.

Authors:  I B Leskov; V A Klenchin; J W Handy; G G Whitlock; V I Govardovskii; M D Bownds; T D Lamb; E N Pugh; V Y Arshavsky
Journal:  Neuron       Date:  2000-09       Impact factor: 17.173

Review 4.  Activation, deactivation, and adaptation in vertebrate photoreceptor cells.

Authors:  M E Burns; D A Baylor
Journal:  Annu Rev Neurosci       Date:  2001       Impact factor: 12.449

5.  Membrane protein diffusion sets the speed of rod phototransduction.

Authors:  P D Calvert; V I Govardovskii; N Krasnoperova; R E Anderson; J Lem; C L Makino
Journal:  Nature       Date:  2001-05-03       Impact factor: 49.962

6.  The role of steady phosphodiesterase activity in the kinetics and sensitivity of the light-adapted salamander rod photoresponse.

Authors:  S Nikonov; T D Lamb; E N Pugh
Journal:  J Gen Physiol       Date:  2000-12       Impact factor: 4.086

7.  Emergent properties of networks of biological signaling pathways.

Authors:  U S Bhalla; R Iyengar
Journal:  Science       Date:  1999-01-15       Impact factor: 47.728

8.  Linear transduction of natural stimuli by dark-adapted and light-adapted rods of the salamander, Ambystoma tigrinum.

Authors:  T Q Vu; S T McCarthy; W G Owen
Journal:  J Physiol       Date:  1997-11-15       Impact factor: 5.182

9.  Binding of the cGMP-gated channel to the Na/Ca-K exchanger in rod photoreceptors.

Authors:  A Schwarzer; H Schauf; P J Bauer
Journal:  J Biol Chem       Date:  2000-05-05       Impact factor: 5.157

10.  Interaction of glutamic-acid-rich proteins with the cGMP signalling pathway in rod photoreceptors.

Authors:  H G Körschen; M Beyermann; F Müller; M Heck; M Vantler; K W Koch; R Kellner; U Wolfrum; C Bode; K P Hofmann; U B Kaupp
Journal:  Nature       Date:  1999-08-19       Impact factor: 49.962

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  16 in total

1.  Consequences of molecular-level Ca2+ channel and synaptic vesicle colocalization for the Ca2+ microdomain and neurotransmitter exocytosis: a monte carlo study.

Authors:  Vahid Shahrezaei; Kerry R Delaney
Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

2.  A kinetic analysis of mouse rod and cone photoreceptor responses.

Authors:  Jürgen Reingruber; Norianne T Ingram; Khris G Griffis; Gordon L Fain
Journal:  J Physiol       Date:  2020-07-14       Impact factor: 5.182

3.  Modeling the role of incisures in vertebrate phototransduction.

Authors:  Giovanni Caruso; Paolo Bisegna; Lixin Shen; Daniele Andreucci; Heidi E Hamm; Emmanuele DiBenedetto
Journal:  Biophys J       Date:  2006-05-19       Impact factor: 4.033

4.  Detection of single photons by toad and mouse rods.

Authors:  Jürgen Reingruber; Johan Pahlberg; Michael L Woodruff; Alapakkam P Sampath; Gordon L Fain; David Holcman
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-08       Impact factor: 11.205

5.  Will the rod bend or break? Analyzing the structural resilience of cellular organelles.

Authors:  Yiannis Koutalos
Journal:  Biophys J       Date:  2013-01-22       Impact factor: 4.033

6.  Explicit spatiotemporal simulation of receptor-G protein coupling in rod cell disk membranes.

Authors:  Johannes Schöneberg; Martin Heck; Klaus Peter Hofmann; Frank Noé
Journal:  Biophys J       Date:  2014-09-02       Impact factor: 4.033

7.  Dynamics of mouse rod phototransduction and its sensitivity to variation of key parameters.

Authors:  L Shen; G Caruso; P Bisegna; D Andreucci; V V Gurevich; H E Hamm; E DiBenedetto
Journal:  IET Syst Biol       Date:  2010-01       Impact factor: 1.615

8.  Diffusion of the second messengers in the cytoplasm acts as a variability suppressor of the single photon response in vertebrate phototransduction.

Authors:  Paolo Bisegna; Giovanni Caruso; Daniele Andreucci; Lixin Shen; Vsevolod V Gurevich; Heidi E Hamm; Emmanuele DiBenedetto
Journal:  Biophys J       Date:  2008-05-01       Impact factor: 4.033

9.  Kinetics of rhodopsin deactivation and its role in regulating recovery and reproducibility of rod photoresponse.

Authors:  Giovanni Caruso; Paolo Bisegna; Leonardo Lenoci; Daniele Andreucci; Vsevolod V Gurevich; Heidi E Hamm; Emmanuele DiBenedetto
Journal:  PLoS Comput Biol       Date:  2010-12-16       Impact factor: 4.475

10.  Analysis of waveform and amplitude of mouse rod and cone flash responses.

Authors:  Annia Abtout; Gordon Fain; Jürgen Reingruber
Journal:  J Physiol       Date:  2021-06-08       Impact factor: 6.228

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