Literature DB >> 16714347

Modeling the role of incisures in vertebrate phototransduction.

Giovanni Caruso1, Paolo Bisegna, Lixin Shen, Daniele Andreucci, Heidi E Hamm, Emmanuele DiBenedetto.   

Abstract

Phototransduction is mediated by a G-protein-coupled receptor-mediated cascade, activated by light and localized to rod outer segment (ROS) disk membranes, which, in turn, drives a diffusion process of the second messengers cGMP and Ca2+ in the ROS cytosol. This process is hindered by disks-which, however, bear physical cracks, known as incisures, believed to favor the longitudinal diffusion of cGMP and Ca2+. This article is aimed at highlighting the biophysical functional role and significance of incisures, and their effect on the local and global response of the photocurrent. Previous work on this topic regarded the ROS as well stirred in the radial variables, lumped the diffusion mechanism on the longitudinal axis of the ROS, and replaced the cytosolic diffusion coefficients by effective ones, accounting for incisures through their total patent area only. The fully spatially resolved model recently published by our group is a natural tool to take into account other significant details of incisures, including their geometry and distribution. Using mathematical theories of homogenization and concentrated capacity, it is shown here that the complex diffusion process undergone by the second messengers cGMP and Ca2+ in the ROS bearing incisures can be modeled by a family of two-dimensional diffusion processes on the ROS cross sections, glued together by other two-dimensional diffusion processes, accounting for diffusion in the ROS outer shell and in the bladelike regions comprised by the stack of incisures. Based on this mathematical model, a code has been written, capable of incorporating an arbitrary number of incisures and activation sites, with any given arbitrary distribution within the ROS. The code is aimed at being an operational tool to perform numerical experiments of phototransduction, in rods with incisures of different geometry and structure, under a wide spectrum of operating conditions. The simulation results show that incisures have a dual biophysical function. On the one hand, since incisures line up from disk to disk, they create vertical cytoplasmic channels crossing the disks, thus facilitating diffusion of second messengers; on the other hand, at least in those species bearing multiple incisures, they divide the disks into lobes like the petals of a flower, thus confining the diffusion of activated phosphodiesterase and localizing the photon response. Accordingly, not only the total area of incisures, but their geometrical shape and distribution as well, significantly influence the global photoresponse.

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Year:  2006        PMID: 16714347      PMCID: PMC1518654          DOI: 10.1529/biophysj.106.083618

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  39 in total

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Authors:  M Gray-Keller; W Denk; B Shraiman; P B Detwiler
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Authors:  I B Leskov; V A Klenchin; J W Handy; G G Whitlock; V I Govardovskii; M D Bownds; T D Lamb; E N Pugh; V Y Arshavsky
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3.  THE ULTRASTRUCTURE OF THE RECEPTOR OUTER SEGMENTS IN THE RETINA OF THE LEOPARD FROG (RANA PIPIENS).

Authors:  S E NILSSON
Journal:  J Ultrastruct Res       Date:  1965-02

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Authors:  A I COHEN
Journal:  Exp Eye Res       Date:  1963-01       Impact factor: 3.467

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Authors:  A I COHEN
Journal:  Am J Anat       Date:  1960-07

6.  Light-dependent redistribution of arrestin in vertebrate rods is an energy-independent process governed by protein-protein interactions.

Authors:  K Saidas Nair; Susan M Hanson; Ana Mendez; Eugenia V Gurevich; Matthew J Kennedy; Valery I Shestopalov; Sergey A Vishnivetskiy; Jeannie Chen; James B Hurley; Vsevolod V Gurevich; Vladlen Z Slepak
Journal:  Neuron       Date:  2005-05-19       Impact factor: 17.173

7.  Association of kinesin with microtubules in diverse cytoskeletal systems in the outer segments of rods and cones.

Authors:  M S Eckmiller; A Toman
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Review 8.  Regulation of sensitivity in vertebrate rod photoreceptors by calcium.

Authors:  Y Koutalos; K W Yau
Journal:  Trends Neurosci       Date:  1996-02       Impact factor: 13.837

9.  Mathematical and computational modelling of spatio-temporal signalling in rod phototransduction.

Authors:  G Caruso; H Khanal; V Alexiades; F Rieke; H E Hamm; E DiBenedetto
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10.  Kinetics of recovery of the dark-adapted salamander rod photoresponse.

Authors:  S Nikonov; N Engheta; E N Pugh
Journal:  J Gen Physiol       Date:  1998-01       Impact factor: 4.086

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  19 in total

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2.  Overexpression of rhodopsin alters the structure and photoresponse of rod photoreceptors.

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3.  Detection of single photons by toad and mouse rods.

Authors:  Jürgen Reingruber; Johan Pahlberg; Michael L Woodruff; Alapakkam P Sampath; Gordon L Fain; David Holcman
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4.  Identification of key factors that reduce the variability of the single photon response.

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5.  Explicit spatiotemporal simulation of receptor-G protein coupling in rod cell disk membranes.

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6.  Submembrane assembly and renewal of rod photoreceptor cGMP-gated channel: insight into the actin-dependent process of outer segment morphogenesis.

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7.  How rods respond to single photons: Key adaptations of a G-protein cascade that enable vision at the physical limit of perception.

Authors:  Jürgen Reingruber; David Holcman; Gordon L Fain
Journal:  Bioessays       Date:  2015-09-10       Impact factor: 4.345

8.  Dynamics of mouse rod phototransduction and its sensitivity to variation of key parameters.

Authors:  L Shen; G Caruso; P Bisegna; D Andreucci; V V Gurevich; H E Hamm; E DiBenedetto
Journal:  IET Syst Biol       Date:  2010-01       Impact factor: 1.615

9.  Kinetics of turn-offs of frog rod phototransduction cascade.

Authors:  Luba A Astakhova; Michael L Firsov; Victor I Govardovskii
Journal:  J Gen Physiol       Date:  2008-11       Impact factor: 4.086

10.  Diffusion of the second messengers in the cytoplasm acts as a variability suppressor of the single photon response in vertebrate phototransduction.

Authors:  Paolo Bisegna; Giovanni Caruso; Daniele Andreucci; Lixin Shen; Vsevolod V Gurevich; Heidi E Hamm; Emmanuele DiBenedetto
Journal:  Biophys J       Date:  2008-05-01       Impact factor: 4.033

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