Literature DB >> 12925990

Chemical and functional diversity of small molecule ligands for RNA.

Thomas Hermann1.   

Abstract

Functional RNAs such as ribosomal RNA and structured domains of mRNA are targets for small molecule ligands that can act as modulators of the RNA biological activity. Natural ligands for RNA display a bewildering structural and chemical complexity that has yet to be matched by synthetic RNA binders. Comparison of natural and artificial ligands for RNA may help to direct future approaches to design and synthesize potent novel scaffolds for specific recognition of RNA targets. Copyright 2003 Wiley Periodicals, Inc.

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Year:  2003        PMID: 12925990     DOI: 10.1002/bip.10410

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  21 in total

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Journal:  Oncogene       Date:  2012-01-23       Impact factor: 9.867

2.  Targeting RNA with cysteine-constrained peptides.

Authors:  Virginia A Burns; Benjamin G Bobay; Anne Basso; John Cavanagh; Christian Melander
Journal:  Bioorg Med Chem Lett       Date:  2007-11-28       Impact factor: 2.823

Review 3.  rRNA Binding Sites and the Molecular Mechanism of Action of the Tetracyclines.

Authors:  Chinwe U Chukwudi
Journal:  Antimicrob Agents Chemother       Date:  2016-07-22       Impact factor: 5.191

4.  Discovery of Key Physicochemical, Structural, and Spatial Properties of RNA-Targeted Bioactive Ligands.

Authors:  Brittany S Morgan; Jordan E Forte; Rebecca N Culver; Yuqi Zhang; Amanda E Hargrove
Journal:  Angew Chem Int Ed Engl       Date:  2017-09-18       Impact factor: 15.336

5.  1,3-Diazepanes of natural product-like complexity from cyanamide-induced rearrangement of epoxy-delta-lactams.

Authors:  Sanjay Dutta; Cody J Higginson; Bao T Ho; Kevin D Rynearson; Sergey M Dibrov; Thomas Hermann
Journal:  Org Lett       Date:  2010-01-15       Impact factor: 6.005

6.  A modular approach to synthetic RNA binders of the hepatitis C virus internal ribosome entry site.

Authors:  Maia Carnevali; Jerod Parsons; David L Wyles; Thomas Hermann
Journal:  Chembiochem       Date:  2010-07-05       Impact factor: 3.164

Review 7.  The structural and functional diversity of metabolite-binding riboswitches.

Authors:  Adam Roth; Ronald R Breaker
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

8.  Dynamic combinatorial selection of molecules capable of inhibiting the (CUG) repeat RNA-MBNL1 interaction in vitro: discovery of lead compounds targeting myotonic dystrophy (DM1).

Authors:  Peter C Gareiss; Krzysztof Sobczak; Brian R McNaughton; Prakash B Palde; Charles A Thornton; Benjamin L Miller
Journal:  J Am Chem Soc       Date:  2008-12-03       Impact factor: 15.419

9.  Multivalent binding oligomers inhibit HIV Tat-TAR interaction critical for viral replication.

Authors:  Deyun Wang; Jaclyn Iera; Heather Baker; Priscilla Hogan; Roger Ptak; Lu Yang; Tracy Hartman; Robert W Buckheit; Alexandre Desjardins; Ao Yang; Pascale Legault; Venkat Yedavalli; Kuan-Teh Jeang; Daniel H Appella
Journal:  Bioorg Med Chem Lett       Date:  2009-10-23       Impact factor: 2.823

10.  Noncovalent probes for the investigation of structure and dynamics of protein-nucleic acid assemblies: the case of NC-mediated dimerization of genomic RNA in HIV-1.

Authors:  Kevin B Turner; Andrew S Kohlway; Nathan A Hagan; Daniele Fabris
Journal:  Biopolymers       Date:  2009-04       Impact factor: 2.505

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